| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0244 |
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| Symbol | |
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| ID | 8413092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 286697 |
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| End bp | 288052 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645021812 |
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| Product | dihydropyrimidinase |
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| Protein accession | YP_003179267 |
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| Protein GI | 257784050 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type
[TIGR02033] D-hydantoinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.20857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.276303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTAT TAAAGAATGG TTTTCTTGTA TTGCCTGAAG GCGTCTTCTG TGGAGACTTA
GTGCTCGATG GTACAAAAAT CATCCAGGTG GGAGGTACGT ACGAGGCACG TATAGATGAC
AACGTTATCG ATGTTACGGG TAAATACGTA TTCCCTGGTT TTATTGACGC TCATACGCAT
ATGCAATGCT GGACAGGCAT GGACTGGACA GCAGATAGCT TTGAGACGGG AACCCGTGCT
GCTGCTTGCG GCGGTACCAC CACTATTGTG GATTATGCCA CACAAGACAA AGGCATGACG
CTACCCGAAG CGCTTGATGA GTGGCATAAA CGTGCAGATG GTACCTGTAC TGCTAACTAT
GCATTTCATA TGGCCATTGC TGATTGGAAT GAACAAACTA AAGCAGATAT GCAGGCTATG
CGCGATGCAG GCGTTATGTC ATTTAAGACC TATTTTGCCT ACGATCATCT GCGTTTAGAT
GACGCTCAGA CGCTTGAGGT ACTTGAATAT ATCCGTGATA TTGACGGTGT CCTGTGCGTT
CACTGCGAGA ATGGCACGCT TGTGAATGAG CTACAAAGAC GTATGCTCGC AGCTGGTATT
ACTGGTCCTG AGGGTCATCC TATGAGTCGT CCTGCAGCTT GTGAAGCAGA GGCTATTTCT
CGTCTGTGTT ATCTTGCGGA GCTTGCCGAT GCTCGTATCA ACATTGTTCA CCTGTCCAGC
GCTCTTGGTC TTGAGGCGGT TCGTGCGGCT AAGGCACGCG GCAAGGTAAA GATGGATGTT
GAGACCTGTC CTCAGTATCT GTTGCTGGAT GATTCCCGCT ATCTTGAGAG TGACTTTGAG
GGTGCCAAGT ACGTTATGAG TCCACCTTTG CGCAAGCCGC ACGATATTGA GGTATTGCGT
CGGGCCGTAT GTGACGGCGA GATTGATACC ATTGCTACCG ATCACTGCAG TTTCAATCTT
CACGGTCAAA AAGATCGCGG CATCGACGAT TTCACTCACA TTCCCAATGG CGGTCCTGGT
GTAGAACATC GACCCGGTCT TATCATGACC TCGTTTGAGA ATCGCTTGGG CGTCCAAGAC
TTTGCTCGTC TCATGAGTGA GGGACCCGCT CGTGTCTTTG GTATGTATCC GCGCAAGGGT
GTCCTGCGTG TTGGCTCCGA TGCTGACGTG ACGGTATGGG ATCCAAGTGT GACGTGGACC
ATCAGCGAGA AGAACCAGCA TCAAAACGTT GACTATACGC CATATGAGGG CTTTGAGGTC
CACGGACGTC CGGCGTATGT TTTTGTCAAC GGAGAGCTGG CAGTGGTTGA TGGTGAGCCA
ACCGGCGTGA AGCCAGGCGC ATACGTCAAA CGGTAA
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| Protein sequence | MNVLKNGFLV LPEGVFCGDL VLDGTKIIQV GGTYEARIDD NVIDVTGKYV FPGFIDAHTH
MQCWTGMDWT ADSFETGTRA AACGGTTTIV DYATQDKGMT LPEALDEWHK RADGTCTANY
AFHMAIADWN EQTKADMQAM RDAGVMSFKT YFAYDHLRLD DAQTLEVLEY IRDIDGVLCV
HCENGTLVNE LQRRMLAAGI TGPEGHPMSR PAACEAEAIS RLCYLAELAD ARINIVHLSS
ALGLEAVRAA KARGKVKMDV ETCPQYLLLD DSRYLESDFE GAKYVMSPPL RKPHDIEVLR
RAVCDGEIDT IATDHCSFNL HGQKDRGIDD FTHIPNGGPG VEHRPGLIMT SFENRLGVQD
FARLMSEGPA RVFGMYPRKG VLRVGSDADV TVWDPSVTWT ISEKNQHQNV DYTPYEGFEV
HGRPAYVFVN GELAVVDGEP TGVKPGAYVK R
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