| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0216 |
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| Symbol | |
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| ID | 8413064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 255332 |
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| End bp | 256105 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645021784 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003179239 |
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| Protein GI | 257784022 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.692272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC TTAAGCAATT TGCAGCAGTC GTACGACTTA ATATTCGCCT CCAACTAATG
GACCCAACTC CTACGCTCAT TCTGAGCATC TTCCCTCTTG TTATGATTCC TTTTATGGAG
CCTGCTTTTA AATCTATGCT TTTAGCCGAT GGTTATACCA ACGTCACGGG AGTAGAACAA
GCAATACCTG GTATGGCTAT ATTTTTCTCT TTCCTCTCGG TACAAACTAT CATTCAATCT
TTCTTCCGTG AATATGCCTG GGGTATGTGG CCTCGTCTGG AAGCGTCCTC AACTCCTCAA
GGCACAATTC TTGCAGGAAA AGCGTTTGTT GCTTACCTCA TACAAGCCGT TCAAGTTCTT
ACCGTTCTTG GTCTTGGTGC ACTAATTTTT GGATATCGAC CAACCGGAAA CGTTGTGGCA
CTTATCTTGG TAATCCTTAC ATTCTCAGCA GTTCTTGCTG CTTTAGGTGT AGCGCTTGCT
CTTTGGACGC CCACAGAAGA CATTGCTTTG TCTCTTTCTA ACATCGTAGG TATGCTTGCT
GCAGGAATCG GTGGATCTTT CTGTACTGTT TCAAGTTTTC CAGACTGGGC TCAATCCGTG
GCAAAATTCT CACCAGCTTA CTGGGCACTT AATGCAGTTC ATGCAGTCAG TTTAGATGGT
GCTGGTATGA CTGACGTATT GCCTCAAATT GGCATGCTTG GGATATTCTT TGTAATTCTT
ACAATACTTG TGGTGATACA ATTTACGTTT AAGAAAGGTC AACAATCCCG TTAA
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| Protein sequence | MTTLKQFAAV VRLNIRLQLM DPTPTLILSI FPLVMIPFME PAFKSMLLAD GYTNVTGVEQ
AIPGMAIFFS FLSVQTIIQS FFREYAWGMW PRLEASSTPQ GTILAGKAFV AYLIQAVQVL
TVLGLGALIF GYRPTGNVVA LILVILTFSA VLAALGVALA LWTPTEDIAL SLSNIVGMLA
AGIGGSFCTV SSFPDWAQSV AKFSPAYWAL NAVHAVSLDG AGMTDVLPQI GMLGIFFVIL
TILVVIQFTF KKGQQSR
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