| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0160 |
|---|
| Symbol | |
|---|
| ID | 8413006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 184288 |
|---|
| End bp | 185589 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645021730 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003179187 |
|---|
| Protein GI | 257783970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAGG GTATTTTGAT CCTCTTGGTT TTTGTAGCTG TCGCTGCATT AATGATGACC
AAGAAGATCC CAACTCTGCT AGCCCTGCCA CTGATGGCTA TTTTGATTTG TGTCATCGCG
GGCGTTCCAA TGTTTGGAAA AGATGGCGAC GGAAAAGAAA TTGGTTGGCT AACATCAGTG
TTTGAGGCTG GAACCGTTCG CATGGGCGCC GCAATCATGG CTGTTATTTT TGGCGCATGG
TTGGGTCAGC TTATGAACAA GACTGGCGTT ACTGAGACAA TTATTAAGAA GAGTGCAGAG
CTTGGTGGCG ATAAGCCCCT GGTAATCACT TTAATTATGT CTGTTGCGGT CGCTGTCCTC
TTTACTACAC TTTCTGGCTT GGGATCAATC ATTATGGTTG GCTCAATTGT TTTGCCAATT
TTGATTTCTG TTGGTGTTCC CGCAGCTAGT GCAGCATGTA TCTTCTTGAT GTCATTCACC
ACTGGTCTGG CGCTTAATAT TGCTAACTGG ACAACTTTTG CTAAGCTCTT CAATCTTGAT
ATTGCTCAGG TTCAGGGTTT TGAGGTATAT CTGGCTGTTG CAACTGGTAT TGCAACTTTA
ATCATGATTA TTGTTGAGTT TAAGCGTAAT GGTATTAAGT TTGCCTTCAG TGCTCCAGTT
ACTGAGCAGA GCAACTCTAA GCAGCTTACT GGTGTTGCAG GCGGTCTTGC AATGCTGACT
CCATTGATTC CTATTGTGCT TGTTGCTTTC TTGAAGGTCC CTGTTACCCC AGCATTTACC
GTTGGTATTC TGTGGTGCTT GCTGTTTACT TCTAAGAGCT TTAGTAAGGC AATGAATCTT
TTGGCAAAGA CCTGCTATGA CGGTGTTACC GACGCTGGTC CTGCAATTAT TTTGATGGTT
GGTATTGGTA TTCTCTATCT TGCAGTTACC AATCCAACGG TTAAGGCAGT TCTTAATCCA
TTCCTGCTTG GCATCATGCC ACAGAATCTC ATTGCATACA TTATCTTCTT TGCGGTTCTC
TCGCCATTAG CCTTGTATCG TGGACCTATG AACATGTTTG GTCTTGGTTC TGGTATTGCA
GCTCTTATCA TTGGTCTGAA CACCTTGAAT CCTCTTGCTG TTATGGGTGC ATTCCTGGCT
GCAGAGCGTA TCCAGGCAGG TGGCGACCCA ACCAATACTC AGAACGTTTG GACTGCAAAC
TTCTGTGAGG TTGACGTCAA CACTGTTACT CGTAAGATGC TCCCTTATCT CTGGGTAGTT
TCCATCTTTG GTGTAATTCT GTCTGGTGTT CTGTACTTCT AA
|
|---|
| Protein sequence | MVQGILILLV FVAVAALMMT KKIPTLLALP LMAILICVIA GVPMFGKDGD GKEIGWLTSV
FEAGTVRMGA AIMAVIFGAW LGQLMNKTGV TETIIKKSAE LGGDKPLVIT LIMSVAVAVL
FTTLSGLGSI IMVGSIVLPI LISVGVPAAS AACIFLMSFT TGLALNIANW TTFAKLFNLD
IAQVQGFEVY LAVATGIATL IMIIVEFKRN GIKFAFSAPV TEQSNSKQLT GVAGGLAMLT
PLIPIVLVAF LKVPVTPAFT VGILWCLLFT SKSFSKAMNL LAKTCYDGVT DAGPAIILMV
GIGILYLAVT NPTVKAVLNP FLLGIMPQNL IAYIIFFAVL SPLALYRGPM NMFGLGSGIA
ALIIGLNTLN PLAVMGAFLA AERIQAGGDP TNTQNVWTAN FCEVDVNTVT RKMLPYLWVV
SIFGVILSGV LYF
|
|---|
| |