| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0111 |
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| Symbol | |
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| ID | 8412954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 125674 |
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| End bp | 127146 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645021678 |
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| Product | dihydropteroate synthase |
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| Protein accession | YP_003179138 |
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| Protein GI | 257783921 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0294] Dihydropteroate synthase and related enzymes |
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| TIGRFAM ID | [TIGR01496] dihydropteroate synthase
[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.119932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTC AAAGCTACAA CACCTGGCAA TGTGGAGCTC ACACTATCTC GTTGGCTCGT
CCTAGAATCA TGGGCGTTCT CAATGTCACT CCAGATTCAT TTTCTGATGG CGGAAAGAAC
TTTGATCCAG AGGCAGCAAT TGCTCGCGGA TTGCAGATGC TAGATGAGGG CGCTGACATT
ATTGATGTTG GTGGAGAGTC TACTCGTCCA GGTCACACGC CTGTTCTACC TACAGAAGAG
GCTGAACGCG TAGTACCTGT GGTGCGTGCG TTGGTAGCTG CTGGCGCAAT TGTTTCCATT
GACACGCGCC ATGCTGAGGT GGCTAAGATG TGCGTCCGTC TTGGAGTATC AATCATCAAC
GACGTCACGG GCTTCACTGA TCCAGAGATG GTTGCTGTAG CTGCGGAATC TGATTGTGGC
TGCATTGTGA TGCACTGGAA CAAAGAAGGC CTTGGTGCTC GTGTTGAGCG CAAGCAGGTT
CAGTTGGACG ATATGCGTCC TTCTCGCCCT ACTGGCAGTG CAGCTGCTCG AGCTGCAGCT
ACAGGTACTG AAACACGCAC ATTAAGTTCG CAACGTCGTT TTACCTTGCC TGAAGAGGCA
CCTATCATGC GTCAGATTAT GGGATTTTTG GGTGATCAGG CTCGCGGTTT GATGCGTGCT
GGTGTATCCA AGGACCGCAT CTGCATTGAC CCAGGTCCAG GTTTTGACAA GTTTGCCGAC
GAAGATGTTG TTATTCAGCG CGCTACTCGT TCTATGGTTT CTATGGGATA TCCGCTGCTC
TGTGCGGTGT CTAGAAAGCG CTTTGTTGGC GCTGTTTCTG GTGTAACTGA GACTACGCAG
CGTGATGCAG CTACGCACGC AATTTGCATT GCTGCAATTA CCAACGGTGC CCGTATCCTG
CGTGTTCACG ACGTTGCAGG AACCGCTCAA GCCATCAATG CCTATTGGGC TATGACTGAG
CACGACCCTC GTCAGGGATT TGTAGCGCTT GGCTCTAACG TGGGTGACCG CGTAGGCTAT
CTGGCTCGAG CTACACAGCT CATCGATGAA ATTCCACTGA CCTGCGTTGT TTCGGTCAGC
CACGCGTATG AGACCGAGCC TGCGTATGGT ATTGCCACGC CTGTGGTAAA TGCTGTTGCC
GAGATTAGAA CTGAGCTCCA TCCGCTTGTG CTTATGGATA AGCTGCTTGA GGTAGAGAAC
GCTTTGAACC GCACACGCAA GAAGGGCGAA GAGGGCCACG GTCCTCGTAC TATCGACTGC
GATCTTCTGT GGGTTGAGGG CGAACAACAC GCAGGTAAAC ACCTCACTCT GCCTCATCCA
CGCATGGGCG AACGTGATTA CGTACTTGTT CCTATGGAGG ATCTGATGCA TGATCCTGTA
CGCTTCTTCT CACATGGTGA CGTAGATATT GTCCCTCCTG ATCAGCGCGT CGGTCACGTA
ACCGAGGACT TGGGAGCCAT TACGTGGGAG TAG
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| Protein sequence | MLRQSYNTWQ CGAHTISLAR PRIMGVLNVT PDSFSDGGKN FDPEAAIARG LQMLDEGADI
IDVGGESTRP GHTPVLPTEE AERVVPVVRA LVAAGAIVSI DTRHAEVAKM CVRLGVSIIN
DVTGFTDPEM VAVAAESDCG CIVMHWNKEG LGARVERKQV QLDDMRPSRP TGSAAARAAA
TGTETRTLSS QRRFTLPEEA PIMRQIMGFL GDQARGLMRA GVSKDRICID PGPGFDKFAD
EDVVIQRATR SMVSMGYPLL CAVSRKRFVG AVSGVTETTQ RDAATHAICI AAITNGARIL
RVHDVAGTAQ AINAYWAMTE HDPRQGFVAL GSNVGDRVGY LARATQLIDE IPLTCVVSVS
HAYETEPAYG IATPVVNAVA EIRTELHPLV LMDKLLEVEN ALNRTRKKGE EGHGPRTIDC
DLLWVEGEQH AGKHLTLPHP RMGERDYVLV PMEDLMHDPV RFFSHGDVDI VPPDQRVGHV
TEDLGAITWE
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