| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0011 |
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| Symbol | |
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| ID | 8412851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 14882 |
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| End bp | 15961 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645021579 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179042 |
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| Protein GI | 257783825 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAG AGAAAAAAGG CGTACGCCTT GAGCACATTT CTAAGATTTA TCAGGATCAA
AAAACTGGAA AAGACTTCTA TGCAGTTCAA GATGCTAATA TCACTATTGA TCCTGGTGAG
TTTGTAACAT TACTTGGACC CTCTGGCTGC GGAAAAACCA CTATTCTGCG CATGATTGCT
GGTTTTGAAA GCCCTGATGA GGGAAAGATT TTCCTTGGTG ATGAGCAGAT TGATGAGCTT
ACTCCAAACA AGCGCGATAC CGCCATGGTG TTCCAGAGCT ATGCGCTTCT GCCTCACTAC
AATATCTTTG ACAACGTTGC ATACGGTCTT AAGCTCCGCA AAATGGACAA GGCAATAATT
CGCGAGAAGG TCCTTCACAT CCTAGATCTT GTTGGACTTG AAGGTATGGA AGAGCGCATG
ACCAATCAGC TTTCCGGTGG TCAACAGCAG CGTGTTGCTT TAGCACGCGC TCTGGTTATT
GAGCCAAGCG TTCTTCTCTT TGATGAGCCT CTTTCAAACC TTGATGCAAA ACTGCGCGTT
GATATGCGCA ACGAGATTCG TCGCATTCAG CAGGAGGCTG GCATTACTGC TATTTACGTT
ACACATGACC AGTCAGAGGC AATGGCGCTT TCCGACAACA TTATCATCAT GAAGAAGGGT
GTTGTGGATC AAGTTGGTGA TCCACAGACG GTTTATTACC ATCCAGCAGA TGAGTTTGTT
GCAGACTTTA TTGGTGAATC AAATTTTTTG CATGCAACCA TTGCAGAAAA GCTTGACTCT
GAGACTGCTC TTTGTCGCTT TGAGGGTCAC GAGTTTGAGG TTAGCGGATG CTCTCATCTG
GATAAAGGCA AAGAATGCTG TATTGTTCTT CGCCCGGAGT CCGCACGTCT CACCGATGAA
GGAACCCTTT CCTGTGAGGT GGTACTTTCC CGATTCATGG GTCACTATCA GAACTATCAT
GTTATGGTCG GAGACACGCT CATTAAAATT ACGGACTTCA ACCCTCGCAC ACATAAGGTT
TATAACGTTG GAGATCACGC TTTTGTTGAT TTCACCAAAG ACGAGGTCCA CGTTCTATAA
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| Protein sequence | MATEKKGVRL EHISKIYQDQ KTGKDFYAVQ DANITIDPGE FVTLLGPSGC GKTTILRMIA
GFESPDEGKI FLGDEQIDEL TPNKRDTAMV FQSYALLPHY NIFDNVAYGL KLRKMDKAII
REKVLHILDL VGLEGMEERM TNQLSGGQQQ RVALARALVI EPSVLLFDEP LSNLDAKLRV
DMRNEIRRIQ QEAGITAIYV THDQSEAMAL SDNIIIMKKG VVDQVGDPQT VYYHPADEFV
ADFIGESNFL HATIAEKLDS ETALCRFEGH EFEVSGCSHL DKGKECCIVL RPESARLTDE
GTLSCEVVLS RFMGHYQNYH VMVGDTLIKI TDFNPRTHKV YNVGDHAFVD FTKDEVHVL
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