Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3202 |
Symbol | |
ID | 8412755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 3090884 |
End bp | 3093307 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 645021547 |
Product | blue (type 1) copper domain protein |
Protein accession | YP_003179012 |
Protein GI | 257389239 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.720894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.248673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACACA GAAGAGACGT GCTTGCGAGT CTGGGCATCG CACTGTCGAC TGCACTTGCC GGCTGTTCGG AAGACACCGA CGGCGAGACC GACGGCGAGA GCAGCGACGA AGCGACCGAG ACGGACCGGA CACAGTCGAG TGGCCCCGAA CTCGCGGCTT CGGCCCAGCT CAACGTCTAC CGCGCCCGGC TCTTCGACGC CGTCGCGCTC GGTCGTGCCG GCCAGACCGC CGCGGGAGCG TCCGTCGCCC AGTCGATCTT CCAGCGGTTC GAGAACGCGA CCGGGGAGTA CGGCGCTCAC GAGACGCTGG AACGGACCAG CGAGTCGGCC TACGAGGGAT TCGAGAGCGC GCTCGGGGAA CTCCGGTCGA CGCTCGAAGA CGGCGACACC GACGCCGCCG CCGAGGCGGC GACGACGGCC AGCGACCAGC TCCAGATCGC CCAGCAGGCC CTGATCGGCA ACGACGCCAC GCGCGCACTC GACGCGCTCC TCCTCGGGAG CCGCGCCGCC AACACCCGCG TACTGGGCGA GGCTGGTCAC TTCGAGGCGG CGGCGACCGT GGCCACCGAA ACGACCGAGC GGTTCGAAGA CACGCTCGTC CACGGCGCAC TCGAAAGCGC CGACGGGGAC GCCTACGAGG ACTTCGAGTC CGGACTGGCG TCGATCCAGC GCGCCGCCAG CGAGGGGGAC GCCGAGGGCG TGACCGACGC CGTCGCCGCG GCCCAGTCGG CGGCGGTGGC GGGTGCCTAC GCGCTGGGAA CCGAGTCGGT CGCCGGGACC GGTCACCTCG CAGCGATGCA GTCAGTGGGG TACGACGCCG CGGCACTCGC CGGTCTCGGC GGCCCGAGTG AGGCCCTCGC GCACGCGACG ACGCTGACCA CCTACCGGGC GCGGATCCGG GACGCGGCGT GGCTGGCCGA CGCCGACGAG GGATCGACGG CGGGCACGGT CGTCGGGAAC GTCTTCGCGG ACTTCGAGGG TGCGCGTGCC CACGAAGCGC TGGAAGAAGC CGACCACGAG GCCTACGAGG GGTTCGAGAG CGGCCTGGAG TCGCTCCAGT CGGCCGTCGA GAGCGGCGAA GGCGTCGACG ACGCCCTCGC CACGGTGGAC GAACACCTCC GGACCGGCGT CGCGACGCTG GCCGGCGACC ACGCCCCGGT CCTGCAGGCC GGCTTCTTCC GGGCGCGTCT CGCCGACGCA CGCGAACGCT ACGAGCGAGG TGCGCCCTCG GTCGCCGCGT CGATCACCCA GGAGCTGTTC GAGCGGTTCG AGGCCGACGA GCTCGGGTTC CACGAGACGC TCGAAGAGGC CAGCGAGGAC CTCTACCACC GCTTCGAGGA GGAGCACCTG GCCGGCCTGA TCGAGGCCTA CGAGAACGAC GACAGCGAGG CGGTCACCAC CCACCACGAG GGCGCGCTCG ACGCGCTCCT GGAGTTCGAG GCCACCACCG GGGACAGCGT CGCGAGCGCG GCCGAGACCG CGTACTTCGT CGCTCGCGGA TTCGACAGCG CTACCGTCGC CACGCTGGGC GACAGCGAGC GCGCGGCGAC GATTCCACGG GCCGCCTTCG AGCACTTCGA GAGCGGTGCA GCGGGCTACC ACGAGGCACT GGAACACGCC GACCACGAGA CCTACGAGAC GTTCGAGTCC GATCTGGGCG CGATCCGGTC GACCGCGGAG TCGGGCGGCG ACGTGCGCAG TGCCGTCCAG ACGTTCGTGA GCACCGCGAT CGACGGCATC TACGCCATCG TCGGCGCTGC CGGCGGCTCG AACGGCGCGG CCGCTGCCGC GATCGTACAG GACGTGTACG CCACCTTCGA GGAGGCCCGC GTCCACGAGG CGCTGGAAGA AGCCGACCAC GAGGCCTACG AAGGATTCGA GGCGGCGCTG GAAGCGTACG CGGGCGGACT GGACGGCGAG GGCGACGTGC CCGTCGGTCG CCTCGCAGAC GCGACGCTGC GCGCTCAGTT CGCCGTCGCG GGTGCGCTCG ACGACGCTCC CGTCGGCCAG GACGGCGAGG GGAGCGCCGA GACGGAAGAG ACCGAATCGT CGCTGGAAGG GGGCCCGAAC GTCGTCGACG GCGTCCCGGA CGACGCCGAC CACGTCGTCT CGATGCAGGC AGTGGCCTTC GAGCCGGCCG AGTTGACCGT CTCGGTCGGC GATACGGTCG CCTTCGAGCA CGTCGCCGGT GAAGCCCACA ACGTGGTGGC CCGAGAGGAA GAGCTACCGG CGGACGCGAG CTACTGGGCC TCCGGCGACT TCGACTCCGA GACGGCCGCA GTCGAGGGGT GGGACAACGG ACAGGGTGCC GTCCAGTCGG GCCAGTCCTA CGTCCACACC TTCGAAACGG CCGGCGAACA CCCCTACTAC TGTGTCCCAC ACGAGATGGC GGGCATGGAA GGCACGATCG TCGTCGAAGA GTAA
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Protein sequence | MQHRRDVLAS LGIALSTALA GCSEDTDGET DGESSDEATE TDRTQSSGPE LAASAQLNVY RARLFDAVAL GRAGQTAAGA SVAQSIFQRF ENATGEYGAH ETLERTSESA YEGFESALGE LRSTLEDGDT DAAAEAATTA SDQLQIAQQA LIGNDATRAL DALLLGSRAA NTRVLGEAGH FEAAATVATE TTERFEDTLV HGALESADGD AYEDFESGLA SIQRAASEGD AEGVTDAVAA AQSAAVAGAY ALGTESVAGT GHLAAMQSVG YDAAALAGLG GPSEALAHAT TLTTYRARIR DAAWLADADE GSTAGTVVGN VFADFEGARA HEALEEADHE AYEGFESGLE SLQSAVESGE GVDDALATVD EHLRTGVATL AGDHAPVLQA GFFRARLADA RERYERGAPS VAASITQELF ERFEADELGF HETLEEASED LYHRFEEEHL AGLIEAYEND DSEAVTTHHE GALDALLEFE ATTGDSVASA AETAYFVARG FDSATVATLG DSERAATIPR AAFEHFESGA AGYHEALEHA DHETYETFES DLGAIRSTAE SGGDVRSAVQ TFVSTAIDGI YAIVGAAGGS NGAAAAAIVQ DVYATFEEAR VHEALEEADH EAYEGFEAAL EAYAGGLDGE GDVPVGRLAD ATLRAQFAVA GALDDAPVGQ DGEGSAETEE TESSLEGGPN VVDGVPDDAD HVVSMQAVAF EPAELTVSVG DTVAFEHVAG EAHNVVAREE ELPADASYWA SGDFDSETAA VEGWDNGQGA VQSGQSYVHT FETAGEHPYY CVPHEMAGME GTIVVEE
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