Gene Hmuk_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3179 
Symbol 
ID8412732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3072462 
End bp3072959 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID645021526 
Productprotein of unknown function DUF88 
Protein accessionYP_003178991 
Protein GI257389218 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.488088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.175977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCT CACATCCGGG ACAGCGTGTC GGCGTTCTCG CCGACGCCCA GAACCTCTAT 
CACACCGCCC GGAGTCTTCA TACGCGAAAC ATCGACTACG AAGCACTGCT CGACGAGGCC
GTCAATGACC GGGCGCTCAC CCGCGCCATC GCATACGTCA TCCGAGCGAA CTCGCCCGAC
GAAGAGAGCT TCTTCGAGGC GCTCGAAGAC ATCGGCTTCG AGACCCGCAT CAAGGATATC
AAGACCTTCG GCGACGGCTC GAAGAAGGCC GACTGGGACG TGGGAATGAG CCTCGACGCC
GTCTCGCTGG CCCCCCACGT CGACACGGTC GTGCTCATCA CCGGCGACGG CGACTTCGCC
CGTCTCTGTC GATATCTCCG CCACGAGGGC GTCAAAGTCG AGACGATGGG CTTCGAGGAG
TCGACGGCGG AGGAACTCGT CGAGGCCGCA GACCACTTCC GAAACCTTAG CGACGACGCC
GAGCAGTATC TGTTGTAG
 
Protein sequence
MVVSHPGQRV GVLADAQNLY HTARSLHTRN IDYEALLDEA VNDRALTRAI AYVIRANSPD 
EESFFEALED IGFETRIKDI KTFGDGSKKA DWDVGMSLDA VSLAPHVDTV VLITGDGDFA
RLCRYLRHEG VKVETMGFEE STAEELVEAA DHFRNLSDDA EQYLL