Gene Hmuk_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3136 
Symbol 
ID8412689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp3019755 
End bp3020741 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content70% 
IMG OID645021483 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003178948 
Protein GI257389175 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.30935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.512704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCGG TGCTGATCAT CGGCGGGACG CGCTTCATCG GCCGGGCGAC GGTCGAGGAG 
TTCCGCGAGC ACGGCTACGA CGTGACGATC TGTAACCGCG GGAACCACGC CAATCCCTTC
GCAGACGATC CCGGCGTCGG TCACGTCGAG GGCGACCGAC GCGATCGCGA CGACCTCGAA
GCGGTTCGCG AACAGGTCGA CCCCGACGCC GTGATCGACT GCGTGGCCTA CTTCCCCGAG
GACGTGCGCG TCGCGACCGA CGTGTTCGCC GACGCCGAGG CCTACGTCTA CGTCTCCAGT
GGCGCGTCCT ACGGCGTCGA GCGCGTCCCG AAGCGAGAGA ACGAGACGCC GCTGTGTGAG
TGTACGCCCG AACAGGCGAC GACCGACAGT GCGGCGACCT ACGGGCCGCG GAAAGCCGAG
GGCGACCGCG AGGTGTTCGC GGCGGCCGAG CGCGGGGTAC GCGCCATGAG CGTCCGCCCC
ACCGTCGTTT ACGGGCCACA CGACTACACC GAGCGCTTCG ACTACTGGAT CGATCGCGTG
GACAACCACG ACCGCGTCGC CGTGCCGGGC GACGGGCTGA GCCTCTGGCA GCTGGTCTAC
GTCGAGGACG TCGCCAGCGC GCTCCGGGTC GTCGCCGAGT CGGGCACTGC CGGCGAGGCG
TACAACGTCG GCGACGACCA CGTCCCGACG CTGGGCGAGT GGGTCGATCT GCTGGCAGCG
GCCTGTGACA CCACGGTCGA ACGAGTGGCG GTGAGCGAGC GCGAACTGAG GCGTGTCGGA
CTCGAATCGA CGGAGTTCCC GCTGTATCGG GCCTCGCCAC ACCTGCTCTC GACGGCGAAG
CTGCGCTCGC TGGGCTGGTC GTCGACGCCA CACGAGGCGG CACTGGCGGC GACGGTCGAC
GAACACCGCG AGAGCGAGCG CACGGGGCGA GGCGAGGGGC CCGACCGGGC CGACGAGACG
GCGCTGTTGG CGTCGCTCGA CGAGTGA
 
Protein sequence
MDSVLIIGGT RFIGRATVEE FREHGYDVTI CNRGNHANPF ADDPGVGHVE GDRRDRDDLE 
AVREQVDPDA VIDCVAYFPE DVRVATDVFA DAEAYVYVSS GASYGVERVP KRENETPLCE
CTPEQATTDS AATYGPRKAE GDREVFAAAE RGVRAMSVRP TVVYGPHDYT ERFDYWIDRV
DNHDRVAVPG DGLSLWQLVY VEDVASALRV VAESGTAGEA YNVGDDHVPT LGEWVDLLAA
ACDTTVERVA VSERELRRVG LESTEFPLYR ASPHLLSTAK LRSLGWSSTP HEAALAATVD
EHRESERTGR GEGPDRADET ALLASLDE