Gene Hmuk_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3089 
Symbol 
ID8412642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2970516 
End bp2970833 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content66% 
IMG OID645021436 
ProductDNA-directed RNA polymerase subunit M 1 
Protein accessionYP_003178901 
Protein GI257389128 
COG category[K] Transcription 
COG ID[COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.995345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTCT GTGACGAGTG TAGTTCGATG ATGCACACGG AGGGCGACAC GTGGGTGTGT 
CGCTCCTGTG AGAACGAGGA ATCACGGGAC TCGCACGCCG AAGCGGCGAT GACGACCCAG
GACGGACAGC GGGACGACGG GGCACCCGCC GTCGCCGACG CGACCCAAGA CGCCACCGAG
ACGATGCACG AGTCCTGTCC GGCCGAAGGC TGTGACAGCG ACCGGGCCGG CTACGAGATG
CTGCCCAAGC CGGGCGGCTC CTACGAGGTT CGACTGTTCA CCTGCGTCGA GTGTGGCCAC
AAGTGGCGCG AGTCCTGA
 
Protein sequence
MRFCDECSSM MHTEGDTWVC RSCENEESRD SHAEAAMTTQ DGQRDDGAPA VADATQDATE 
TMHESCPAEG CDSDRAGYEM LPKPGGSYEV RLFTCVECGH KWRES