Gene Hmuk_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3046 
Symbol 
ID8412599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2932619 
End bp2933791 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content69% 
IMG OID645021393 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003178858 
Protein GI257389085 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0751407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCGTC GAACGGTCTT CGGGTCGTTG CTGGGGCTCG TCTTCCTGGT CAACCTCGCA 
CGGGTCGTGT TCGCGCCCCT GCTGGAGCCA CTCGGTACCG CGCTCGACGC CAACGACGCC
GCGCTGGGGA CCATCGCGAC GCTCGCGTGG CTCGGGAGCG CACTGCCTCG CATCCCGACT
GGCTACCTCC TGACGCACAT CTCTCGCAGC GTCGTCATCC TCGCGTCCTC GGGAATCCTG
GCGGTCGCGG CCGTCGCCAC GTCGCTCGCC AACAGCGTCC CGGCCGTGAT GGTGGGGGCC
TTCCTGATGG GACTGGCCAG CGGCTCGTAC TTCATCGCGG GCAATCCCCT GGCGAGCGAA
CTGTTCCCCG ACCGGGTCGG CTCGACCCTG GGTATCCACG GCACCGCCAG CCAGCTCGCC
GCCGTCAGTG CACCGGCGAT CGTCGTTGCC GCTCTGGGCG TCGGCGACTG GCGCACCGTG
TTCCGAGCGA TGGCCGTCGC CGCCGTCGTC TCCGGGATCG CCTTCGCCCT CACCGCTCGT
CGGACGGAGA TGCCCGACGC CGGTGCGGAA GACACCGCCT TCCTGGCGGC CGCGCGCCAC
CAGTGGCGGA TCGTGCTCGC GGGCGTGGCC GTCATCGGCG TCACGGGGCT GGTCTGGAAC
GGCCTGTTCA ACTTCTACGT GAAGTACTTC CTCGCGAAGG GGCTGACCGG TGCCCAGGCG
AACCAGTTGC TGACGATCGC GTTCGGCGCT GGCGTGCCGG CTTTCTTCGT CTCCGGGCGG
CTGGCCGACC GACTGCCGGT GTTGCCCTAC ATCCTCTCGA TCATCGGCGG GTTCCTGCTC
TCGGTCTACG CGACGACGCT GCTGTCCGGC TATCTCGGGC TGGCGGTCCT CAGCGCCGTT
CTCGGCTACG TGATCCACAG CCTCTTTCCC GCGGTCGACA CGTACCTGCT GGGCTCGCTC
CCGGACCACC ACCGCGGGAG CGCCTACGCC GTCTACAGCG GGACGATGAT GATCATCCAG
GCCTCGGGAA GTACGATCGT CGGCAGCCTC TCGTCGGCCG GCTACTCCTT CGAGACGATC
TTCACCTGGC TGGTGGCGGT GCTCGCGGCG GTGTTGCTCG GGCTCACGGG ACTGTACGTC
GACGGCCAGC TTCCGACCGG CGCACGGGCG TAG
 
Protein sequence
MSRRTVFGSL LGLVFLVNLA RVVFAPLLEP LGTALDANDA ALGTIATLAW LGSALPRIPT 
GYLLTHISRS VVILASSGIL AVAAVATSLA NSVPAVMVGA FLMGLASGSY FIAGNPLASE
LFPDRVGSTL GIHGTASQLA AVSAPAIVVA ALGVGDWRTV FRAMAVAAVV SGIAFALTAR
RTEMPDAGAE DTAFLAAARH QWRIVLAGVA VIGVTGLVWN GLFNFYVKYF LAKGLTGAQA
NQLLTIAFGA GVPAFFVSGR LADRLPVLPY ILSIIGGFLL SVYATTLLSG YLGLAVLSAV
LGYVIHSLFP AVDTYLLGSL PDHHRGSAYA VYSGTMMIIQ ASGSTIVGSL SSAGYSFETI
FTWLVAVLAA VLLGLTGLYV DGQLPTGARA