Gene Hmuk_3020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3020 
Symbol 
ID8412573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2907452 
End bp2908555 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content74% 
IMG OID645021367 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003178832 
Protein GI257389059 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.393882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.050284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTCG CCGTCGTCGG TGCCGGGGCC GTCGGCCTGA CCGCCGCACG GACGCTGGCC 
GACCGCGGCA CCGACGTGGT GCTGTACGAC CGCGGGGAGA TCGCCAGCGG TGCGACCGGC
CGCGCGGCGG GGCTGTGCTA CGACGCGTTC GCCGAGGACC GGGACGCCGC GGTGGCCGCC
GACTCGCTCC GGCGGTTCCG CGAACTGGGC GTGCTCACCG AGTGTCCGTA CGTGTGGTAC
GCCCGCGACG GCGACGAGGC AAACGCCGAC GCCATCGCCC AGCAGGTCCC GCGAATGCAG
GCCCACGGGC GCGATGTGGC GCTGGTCGAG CCCGAGCGAC TGGGCGAGCG GTACCCACAG
CTTCGGACCG ACGAGATCGC CGTCGCCGCG ATCGCGCACC GGGCGGGCTT CGTCGATCCG
ACCGAGTACG CGAGTGCGCT GACGGAGACC GTGCTGGAAC GCGGGGTCGG CGTGCGGACG
GAGACGCCCG TCTCGCTGGC CGGGCCGACG ACGGTCGCCG AGCCCGACGG GACGGTCGGG
TTCGACGCCG TGCTCGTGGC CGCCGGACCC GCGACGAAGC CGATCGTCGC CGACGCTGGC
GTCGCGCTCC CGCTACAGGC CTATCGCGCC CAGGCGCTCG TGACGGAGCC GCTACGGGCG
ACGCTCCCGA TGGCCTACGA CGCGACCCAG CAGTGCTACT GGCGGCCCTG TGAGGGTGGA
CTGCTCGTCG GCGACGGTGC CCACGAGGTC GATCCCGACG ACTGGGATCC CGACGCCGAC
GCGAGCTTCG AGCGGAGCGC GCTCGATCGG CTGGCGGCTG CGACGACCGT CGACGCGACG
CGAGCGCAGT CCTGGGCGGG GCTCTGTACC GCGACGCCGG ATCGGGAGCC GCTGCTGGGT
GGCGTCGGGG ACGGGCTCTA CGTGGCGACG GGGTGGCACG GCCACGGCCT CATGCGCTCG
CCGGCCCTGG GCGAGCGGAT CGGCGAGCAG ATCCTCGGCG GGCCGGGCGT CGACGCCTAC
GATCCCGACC GCTTTACCGG CGACGAGACG ATCGACGTGG TCGACGGCAT GACGATCGAC
GAGGACGAGG AGACACCGAG CTGA
 
Protein sequence
MRVAVVGAGA VGLTAARTLA DRGTDVVLYD RGEIASGATG RAAGLCYDAF AEDRDAAVAA 
DSLRRFRELG VLTECPYVWY ARDGDEANAD AIAQQVPRMQ AHGRDVALVE PERLGERYPQ
LRTDEIAVAA IAHRAGFVDP TEYASALTET VLERGVGVRT ETPVSLAGPT TVAEPDGTVG
FDAVLVAAGP ATKPIVADAG VALPLQAYRA QALVTEPLRA TLPMAYDATQ QCYWRPCEGG
LLVGDGAHEV DPDDWDPDAD ASFERSALDR LAAATTVDAT RAQSWAGLCT ATPDREPLLG
GVGDGLYVAT GWHGHGLMRS PALGERIGEQ ILGGPGVDAY DPDRFTGDET IDVVDGMTID
EDEETPS