Gene Hmuk_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3012 
Symbol 
ID8412565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2899432 
End bp2900595 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID645021359 
Producthypothetical protein 
Protein accessionYP_003178824 
Protein GI257389051 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.900551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA AGACGGAGTT CGACCGATCG CGGGTGCTCT GGTGGACCCT CACTGCCGCT 
CTCGTCGGCA CGCTCGGGCT GGTGGTGTAC TCGTATATCG GGACGTTCGT CTTCGGGATA
TTCATCTACT ACGCGGCCCG GCCTGTCTAT CGTCGACTGC GACGCGTCGT CGACCGTCCC
GGATTCGCTG CGGCGGGCGC GCTGTTCGCG TTCGAGATCC CGTTTCTCGC GGTGACCGGC
TACCTCCTGT TTCTCGGCAT CAAGGAACTC GAGCGGTCCG CCGGAGCAGG TGCGGAGGTC
GTCGCCTGGT TCCTGCCGAT CCCCGCCGCG GAACTGGAGC GGGCGGTCGC CGATCCCGCG
ACGTACGTGT CGTCGTTCGA CGCGGCGTCG ATCAACGAGA TCGTCAGTAC CGGCGGGGAC
GTTCTGGGGC CGGTGTCGAC GTTCTTCCTG CATCTCGCGC TGGGGATCGC CATCGCGTTC
TATCTGCTCC GGGACGGGGA GCACATTGCG ACGTGGCTCC GCGAGGAGGT CGGCGAGGAG
TCGGCCCTGT GGCTCTACGC GACGCTGGTC GATCGCGACT TCCAGGTGGT GTACTTCGGG
AACGTCCGCA CCGTGGTCGT CGTCGCGCTG CTCGCCCTGG GCGTCTACAA CGGCCTCAAC
GTGATCGCCC CGCCGGGGCT GAAGATCCCC ATCCCCAACG TCCTCGCGCT CCTGACGGGC
GCGGCGACGC TCGTCCCCAT CGTCGTGGGG AAGATCGTGT ACGTCCCGGT GACGGTGTAC
CTCGGGCTGG CCGCGATCGA GTCGGACCCG GCGACGATCT GGTTCCCCGT CGCCGTGGCC
GTCGTGGCGC TGCTCGTTCT CGATCTGTTC CCCATCATGA TCGTTCGGCC GGTCTTCGCC
GGGCAGAGTA CCCACAGAGG GGCGATGATG TTTTCCTACA TCTTCGGCGG GCTGCTGTTC
AGCTGGTACG GCGTCTTCTT CGGTCCGCTG TTGCTGATCG CGGCCATCCA TCTCGTCCGC
GTGGGCCTCT CGGAGCTCGC CCACGGCGAC CGCGTCACCG CAATGGTGAC GACCGCGCAC
GGACTCGGCT CGATGCCACA GCCCGACGGG GACCCGCCCG ACGAGGCGGC GACCGGGGAG
GCTGACGCCC CCGTCGGAGA GTGA
 
Protein sequence
MIEKTEFDRS RVLWWTLTAA LVGTLGLVVY SYIGTFVFGI FIYYAARPVY RRLRRVVDRP 
GFAAAGALFA FEIPFLAVTG YLLFLGIKEL ERSAGAGAEV VAWFLPIPAA ELERAVADPA
TYVSSFDAAS INEIVSTGGD VLGPVSTFFL HLALGIAIAF YLLRDGEHIA TWLREEVGEE
SALWLYATLV DRDFQVVYFG NVRTVVVVAL LALGVYNGLN VIAPPGLKIP IPNVLALLTG
AATLVPIVVG KIVYVPVTVY LGLAAIESDP ATIWFPVAVA VVALLVLDLF PIMIVRPVFA
GQSTHRGAMM FSYIFGGLLF SWYGVFFGPL LLIAAIHLVR VGLSELAHGD RVTAMVTTAH
GLGSMPQPDG DPPDEAATGE ADAPVGE