Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3002 |
Symbol | |
ID | 8412555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 2885705 |
End bp | 2889283 |
Gene Length | 3579 bp |
Protein Length | 1192 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645021349 |
Product | chromosome segregation protein SMC |
Protein accession | YP_003178814 |
Protein GI | 257389041 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCA AAGAGCTCGT CCTTGACAAC TTCAAGAGTT TCGGCCGGAA GACACGGATC CCCTTCTACG AGGACTTTAC CGTCGTTACC GGCCCCAACG GCTCGGGCAA GTCCAACATC ATCGACTCGA TTCTGTTCGC GCTCGGACTC GCCCGCACCT CCGGCATCCG CGCCGAGAAA CTGACGGATC TGATCTACAA TCCGGGCCAC GCCGACGAGG AGACCGACGG CAGCGGGGAG CGCGAGGCCA GCGTCGAGGT CATCCTCGCG AACGAGGACC GGACACTCGA CCGCTCGCAG GTGATCAACG CGGCCGGCAC CGAAGACGTG GGCGACGTCG ACGAAATCTC GATCAAGCGC CGCGTCAAGG AGACCGAGGA CAACTACTAC TCGTACTACT ACATCAACGG CCGCTCGGTC AACCTCGGCG ACATCCAGGA CCTGCTGGCC CAGGCCGGCG TCGCGCCGGA GGGGTACAAC GTCGTCATGC AGGGCGACGT GACCGAGATC ATCAACATGA CGGCCGGCTC GCGCCGGGAG ATCATCGACG AGATCGCCGG CGTCGCTCAG TTCGACGAGC AGAAAGCCGA CGCCTTCGAG GAACTGGAGG TCGTCCAGGA GCGAATCGAC GAGGCCGAGC TCCGCATCGA GGAGAAACGA GAGCGCCTCG ACCAGCTGGC CGACGAACGC GAGACGGCCC TGCAGTACCA GGAACTCCGC GAGGAGAAAG CGGAGTACGA GGGGTATCGC AAGGCTGCGG AACTCGAAGA CAAGCGCGAG GAGCGCGCGG AGATCCGCGA GGAGATCGGG GCGCTGGAAG ACGAACTCGC GGACCTCCAG CGCGAACTCG ACGAACGCCA GGGCGCGGTC GTCCGCCTCG AAGACGAACT CCAGTCGCTC AACACCGAGA TCGAGCGCAA GGGCGAGGAC GAACAGCTGG CGATCAAACG CGAGATAGAG GAGATCAAAG GCGACATCTC GCGGCTCGAA GACAGCGCCG CGACCGCCGA GGAGAAGGTC GAAGACGCCG AGAACGAGCG CCGGCAGGCG TTCGTCCAGA TCGACCGCAA GCAAGAGACC ATCGACGATC TGGAGAGCGA GATCCGACAG ACGAAAGTCG AGAAGTCGAA CGTCAAAGCC GAGATCAACG AGCGAGAGGC CGAACTCGCG GACGTACAGG CGAAGATCGA CGCGGTCGGC GAGGAGTTCG AGGAGGTCAA GTCGGAGCTA GAGGCAAAGC GGACCGCGCT GGAAGCGGCC AAATCGGCGA AGAACGACCA CCAGCGCGAG CAGGACCGCC TGCTCGACGA CGCACGTCGC CGGTCGAACC AGCAGCGAGA GAAACGCGAC GCGATCGAGG ACGCGGAGGC CGAAATTCCC GACATCGAAG CCGACATCGA GGACCTCGAA ACGGAACTGG AGAAAGCACA GAAGAACTCG GCGACGATCA CCGAGGTCGT CGAGGACCTC ACAGCGGAGA AACGGGAACT CCAGAGCGAC GTCGACGAGC TGGAAGACGA GATCAGCGGG CTCCAACAGG AGTACGCGAA CCTCGAAGCG AAGGCCGGGC AGGACGGTGA CTCCTCGTAC GGCCGGGCGG TGACGACGAT CCTGAACGCC GGCATGGACG GCGTCCACGG CACCGTCGGC CAGCTCGGCG GCGTCGACCC CGACTACGCG ACCGCCTGCG AGACCGCCGC CGGTGGCCGG CTCGCACACG TCGTCGTCGA CGACGACACG GTCGGTCAAC GGGGCATCGA GTACCTGAAG TCCCGCAACG CCGGCCGCGC GACCTTCCTG CCGATCACGG AGATGCACCA GCGGTCGTTG CCCAGCCTCC CCCAGCACGG CGGCGTCGTC GACTTCGCGT ACAACCTCGT CGACTTCGAT CCCGAGTACG CGGGCATCTT CTCCTACGTG CTGGGCGACA CCGTCGTCGT CGCTGACATG GACACCGCCC GCGAGTTCAT GGGCGAGTTC CGGATGGTCA CGCTCGAAGG CGATCTCGTC GAGACCTCCG GCGCGATGAC CGGTGGGTCC TCGTCGGGCA CGCGATACTC CTTCTCGGGC GGCCAGGGCC AGCTCGAACG CGTCGCAGCG AAGATCAACG AGCTGGAAGA CGAACGCCAG GAGCGCCGCG AGGAGCTTCG CGACGTGGAA GCGCGCCTCG ACGACGCCCG CGACCGACAG ACCGACGCGA ACGATCAGGT CCGCGAGATC GAATCCGAGA TCGAGCGCAA GCGGGCGGCC ATCGAGGACG CCCACGACCG CGTCGAGCGC CTGGAGGCGG AACTGGCGGA GATCGAGGCC GAACGCGAGG ACGTCTCCGA CGAGATGGAC GTACTGGAGG GGAAAATCGC CCGCCAGAAC GAGGCCATCG CCATCATCGA GGCGGACATC GACGAGCTGG AGGCGGAGGT CGCCGACTCG CAGCTGCCGG CGCTCACCGA CGAGGCCGAC CGGATCAAAC AGGCGATCGA CGAACTGGAG AGCCGTGAGA GCGACCTCGA CGCCGACCTC AACGAGCTCC AACTGGAGAA GCAGTACGCC GAAGACAACA TCGAGGAGCT CCACGAGGAC ATCGAAGCCG CACAGAACCG CAAAGCCGAG GCCGAGGAAC GGATCGCCGA ACTCGAAGCC GAGATCGAGG AGAAACGCTC CCAGAAAGCC GCCAAAGAAG ACGAGGTCGC GGAGCTGGAG GCCGAGCTGG CGGACCTCAA AAGCGAGCGC GAGGAGCTTC GCGAGGAGCT ACAGGACGCC AAAGAGCGAC GCGACGAACA GCAGTCGAAG GTCAGCGAAC TCGAACGCGA TCTCGACGAC GCCACCGAGG AGCGCGAGCG CCTCGACTGG GAGATCGACG AGCTCGAAGC CGAGGTCGGC GACTACGATC CGGACGAGAT CCCGGATCAC CACGTCGTCG AATCCCAGAT CGGTCGGCTC GAATCCCGGA TGGAGGAACT GGAGCCGGTC AACATGCGCG CGATCGACGA GTACGACGCC GTCGAGGCGG ACTTAGACGA GCTGGAAGAC AAGAAAGAGA CGCTCGTCGA GGAGGCCGAC GGCATCCGCG ACCGGATCGA GACCTACGAG CAGCGCAAGA AGGCGACGTT CATGGACGCC TTCGACGAGA TCAACGAGCA GTTCGAGGAC ATTTTCGAAC GGCTCTCGAA CGGGACGGGC CACCTCCACC TCGAAGACGA GGCCGACCCC TTCGAGGGCG GCCTGACGAT GAAGGCCCAG CCGGGCGACA AGCCGATCCA GCGGCTCAAC GCCATGTCCG GGGGCGAGAA GTCCCTGACG GCGCTGGCCT TTATCTTCGC GATCCAGCGG CACAACCCCG CGCCGTTCTA CGCGCTGGAC GAGGTCGACG CCTTCCTCGA CGCCGCCAAC GCCGAACTGG TCGGCGAGAT GGTCGACGAA CTCGCCGGTG ACGCCCAGTT CGTCGTCGTC TCCCACCGCT CGGCGCTGCT CGACCGCTCC GAGCGGGCCA TCGGCGTGAC GATGCAAGAC GACAACGTGA GCGCGGTGAC CGGAATCGAT CTCACCGGGG AGATCGGGGA GGTGCCGGCG GATGACTAG
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Protein sequence | MHIKELVLDN FKSFGRKTRI PFYEDFTVVT GPNGSGKSNI IDSILFALGL ARTSGIRAEK LTDLIYNPGH ADEETDGSGE REASVEVILA NEDRTLDRSQ VINAAGTEDV GDVDEISIKR RVKETEDNYY SYYYINGRSV NLGDIQDLLA QAGVAPEGYN VVMQGDVTEI INMTAGSRRE IIDEIAGVAQ FDEQKADAFE ELEVVQERID EAELRIEEKR ERLDQLADER ETALQYQELR EEKAEYEGYR KAAELEDKRE ERAEIREEIG ALEDELADLQ RELDERQGAV VRLEDELQSL NTEIERKGED EQLAIKREIE EIKGDISRLE DSAATAEEKV EDAENERRQA FVQIDRKQET IDDLESEIRQ TKVEKSNVKA EINEREAELA DVQAKIDAVG EEFEEVKSEL EAKRTALEAA KSAKNDHQRE QDRLLDDARR RSNQQREKRD AIEDAEAEIP DIEADIEDLE TELEKAQKNS ATITEVVEDL TAEKRELQSD VDELEDEISG LQQEYANLEA KAGQDGDSSY GRAVTTILNA GMDGVHGTVG QLGGVDPDYA TACETAAGGR LAHVVVDDDT VGQRGIEYLK SRNAGRATFL PITEMHQRSL PSLPQHGGVV DFAYNLVDFD PEYAGIFSYV LGDTVVVADM DTAREFMGEF RMVTLEGDLV ETSGAMTGGS SSGTRYSFSG GQGQLERVAA KINELEDERQ ERREELRDVE ARLDDARDRQ TDANDQVREI ESEIERKRAA IEDAHDRVER LEAELAEIEA EREDVSDEMD VLEGKIARQN EAIAIIEADI DELEAEVADS QLPALTDEAD RIKQAIDELE SRESDLDADL NELQLEKQYA EDNIEELHED IEAAQNRKAE AEERIAELEA EIEEKRSQKA AKEDEVAELE AELADLKSER EELREELQDA KERRDEQQSK VSELERDLDD ATEERERLDW EIDELEAEVG DYDPDEIPDH HVVESQIGRL ESRMEELEPV NMRAIDEYDA VEADLDELED KKETLVEEAD GIRDRIETYE QRKKATFMDA FDEINEQFED IFERLSNGTG HLHLEDEADP FEGGLTMKAQ PGDKPIQRLN AMSGGEKSLT ALAFIFAIQR HNPAPFYALD EVDAFLDAAN AELVGEMVDE LAGDAQFVVV SHRSALLDRS ERAIGVTMQD DNVSAVTGID LTGEIGEVPA DD
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