| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2975 |
|---|
| Symbol | |
|---|
| ID | 8412528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2854232 |
|---|
| End bp | 2856655 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645021322 |
|---|
| Product | helicase c2 |
|---|
| Protein accession | YP_003178787 |
|---|
| Protein GI | 257389014 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACT CGGCGGTCGA CGGACGTGGC TGGGAGGAGT ACTTCGCGTT CGACGAGCCG
TACGCGAACC AGGGCGACGC CATCGAGCGC GCGATCGAGG CCGGCGAGGC GCGGGGATAC
CTCGCGATGG AGGGCCCCTG TGGCACTGGC AAGACGATGG CGGCCCTGAC GGCCGGCGCA
CAGCTGCTCG ACGCCGGCCA CTACGAGCGG ATCGTCGTCG TGACGCCGGT CAAGCAGCAA
CTCCAGCAGT TCGTCACGGA CCTCCGCGCG ATGAACGCCG GACTGGACGA GCCACTGAAC
GGCATCTCAC TGGTCGGCAA GCGCGACCTC TGTCCGTACG GGCGCGAAGA TATCTTTCCC
GACGACAGCT CCGTCCACGA CCGCTGTGAA GACCTGCGAG AGAACACGGC ACGGCTCGTC
GAGGCCGAGG GCGACGGCAC CGACCACGCG CCGGCCAGCG CCGCCGTCGA GGCGGAACTC
GGCGACGACG AGCAGTGGTG GGACCCACAG ATCGCCAGCG ACCTCGCGGC GGCGGCCCGA
CCGGACGCCC GCGACCAGCA GCGCTTGGGC GAGGGGACGC TGGGGACCGC CGGTGCCGAC
TCCCCGTATC GACCGAGCCA GCCCGCTGCC CCGGAATCGA TCGCCGACGG CGACGATCCG
CCGCTGTACT GTCCGTTCGA GGCCGACTGG TACGCTCGCA ACACCGGCTC GCCGATCGAC
TTCGGCGTCG GGGAACACAA CGTCGTCACG GCCGAGGAGT ACCTCCCCGC GTCGGTGGAG
TACGGCACCT GTCCACATCG CGCGATGAGC GTCCTGCTGG AGGCTGCCGA CGTGGTGATC
GGCAACTACA ACCACCTGTT CGACCCACAG ACCCGTCCGC TCCTCGCCTC GATCCTCGAC
GAGGACACGT TCGTGGTCGT CGACGAGGCC CACCGGCTCG AAGAGCGCGT CCGCGACCTC
CTCTCGGATC GCGTCGGGAG ACAGACGCTC ACACAGGCCA GAAACGACCT CAACTTCCTG
CTCCAGCGGG CTCGTCAGAC CGACGACCAC CGACAGCAGG TCGAGGAGGT GCTCGCCGCA
CGCGAGGTCC CGCTGGCGGC CGTCGAGCAG GCCCAGCAGC TCTACGACGA CGTACTCGAC
TGGCTCGACG ACCGGGTTCG GACCTACCTC GACGGCGAGT TCGAGGGGTG GCGCACCGAC
CCCGACCAGC TCCCCCAGCG CGACCACGAG ATTCCGCTGC GAGACCCGGA GACCGTCGAA
CCGGACGCCC TGACCGAGTG GGCCGAACGC GAGGGGTACG ACGGCGGCCT GTGGCGCTCG
CTCCCGAAGA TCGGCGCGGC GGTCGAGGAG GCCATCGACA CGCTCGGCCT CTCGCGGACC
CCGGTCTGTG CCGCCGTCGG GACGATCGCG GGCCAGTGGT GGGAACGCGA CCACGCCGGC
TTCCTCAGAG AGATCGAACT GGAACACGCA CCCGCCGACG AGCGCCACGT CGACGCCGAC
TACGAGGTCG CGTACACCGC CGGGCTCCTG TGTTACAACT GTATGCCATC GACGGCGCTT
CGCAACGTCT TCGACGACCT GGGCGGGGGC GTCCTGATGA GTGCGACGCT CGAACCGCTG
GACGTGTTCC AGCACGTCTC CGGACTCTCA TTTCTCCGCG ACGGCGGCCC GGACCGGGAC
CCTCGCTTCG TCACGGCCGC GACCTACGGA CTGACCTTTC CCGCGGACAA TCGCGCGTCG
TATCTCGTGG ACTGTCGCCC CTTCACGGCC CGCAACCGCG GCGATCCCGA GACGATGCGA
CCGCTGGGCG AGGCCTGGAA CCCGACCCGC GACGAGTACG CCCACGCCCT CCGATCGCTG
GCGCGCTCGC CCGGCAACGT CCTCGTGGCG ATGCCGAACT ACCGGGAGGC CGCGTGGGCC
GGCGCGTACC TCGACGACGC CGTCGACAAG CCGGTCCTCG TCGACGAGTC GTCCAGCAAC
GACGCGACGA ACCGCCTCAA GCAACGCTTC TACGACGGGC CGGGCAAGGT GCTCGTCACC
AGCGCACGGG GCACGCTCAC CGAGGGCGTC GACTACGACG GCGAGAAGCT CTCGACCTGC
GCGGTCGTCG GCATCCCGCT GGTCAACATC GGCTCGCCGC GGGTTCGGGG GGTCAAGCGG
GCCTACGGCG ACGCCTTCGG CGACGACGTG GCCTTCGAGT ACGCCCTGAC CGTGCCCGCA
GTCCGGCGCG CCCGCCAGGC CATCGGGCGG GTGATCCGCG GGGCCGAGGA GGTCGGCGTT
CGGGCGTTCG TCGGCCGGCG CTACTGTCCC GAGGCACGCC ACTCCGTCTA CGAGTTCCTG
CCGGAGAACG AACGCGCGGA GTTCACGCAG TTGACCCCGG AGTTCCTGGC CGACCAGCTC
GATCGGTTCT GGGAGCAGGC GTAG
|
|---|
| Protein sequence | MGDSAVDGRG WEEYFAFDEP YANQGDAIER AIEAGEARGY LAMEGPCGTG KTMAALTAGA
QLLDAGHYER IVVVTPVKQQ LQQFVTDLRA MNAGLDEPLN GISLVGKRDL CPYGREDIFP
DDSSVHDRCE DLRENTARLV EAEGDGTDHA PASAAVEAEL GDDEQWWDPQ IASDLAAAAR
PDARDQQRLG EGTLGTAGAD SPYRPSQPAA PESIADGDDP PLYCPFEADW YARNTGSPID
FGVGEHNVVT AEEYLPASVE YGTCPHRAMS VLLEAADVVI GNYNHLFDPQ TRPLLASILD
EDTFVVVDEA HRLEERVRDL LSDRVGRQTL TQARNDLNFL LQRARQTDDH RQQVEEVLAA
REVPLAAVEQ AQQLYDDVLD WLDDRVRTYL DGEFEGWRTD PDQLPQRDHE IPLRDPETVE
PDALTEWAER EGYDGGLWRS LPKIGAAVEE AIDTLGLSRT PVCAAVGTIA GQWWERDHAG
FLREIELEHA PADERHVDAD YEVAYTAGLL CYNCMPSTAL RNVFDDLGGG VLMSATLEPL
DVFQHVSGLS FLRDGGPDRD PRFVTAATYG LTFPADNRAS YLVDCRPFTA RNRGDPETMR
PLGEAWNPTR DEYAHALRSL ARSPGNVLVA MPNYREAAWA GAYLDDAVDK PVLVDESSSN
DATNRLKQRF YDGPGKVLVT SARGTLTEGV DYDGEKLSTC AVVGIPLVNI GSPRVRGVKR
AYGDAFGDDV AFEYALTVPA VRRARQAIGR VIRGAEEVGV RAFVGRRYCP EARHSVYEFL
PENERAEFTQ LTPEFLADQL DRFWEQA
|
|---|
| |