Gene Hmuk_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2950 
Symbol 
ID8412503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2833868 
End bp2835433 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content65% 
IMG OID645021297 
Productpermease 
Protein accessionYP_003178762 
Protein GI257388989 
COG category[R] General function prediction only 
COG ID[COG0701] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0705618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.992984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATCG ACACACTACG GACGGCGGTT GCACTCACGG CCGAGATGGC CTGGGACTCC 
TGGTGGGCTC TCGTCCTCGG ATTGACGCTG TCGGGCGCTG TCGAGGTGTT CGTCGACAGA
CAGACGATGA CGGCAGTCCT CGGCGGTGAC GGCGTTCGCG AGGTGTCGCT GGGGGCACTG
TTCGGAGCGG CGTCGTCGAG TTGCTCGTAT TCGGCGGTCG GGACCACAAA GACCCTGTTC
AAGAAGGGCG CTTCGGCACC GGCCTCGCTC GGCGCGTTCA TGTTCGCCAG CACGGATCTG
GTGATCGAAC TCGGCCTCGC CATGTGGGTC CTGCTGGGCT GGCAGTTCGT CGTCGGCGAG
TACCTCGGCG GCGTCGTTGC CGTGGTCGTG ATGGTGCTGG CGTTTACGCA CGTCGTCCCG
GAGGCGTGGA TCGAGCGCGC ACGAGCCCAC GTTCGGCGCA ACGACGAGGA GACCTGTCCG
ACCTGTGATG CGACGATCAC CGATCCCGAA AACGCAACGA GAGAGCGTGT CGGTGGCGAT
CTCGGGACCT ACTGCTGTGG CGGCTGCCTC CAAGTCGCTC GGGCACAGAG CGACGACGAG
GGCGGGGCGG TCCTGACCGT ACAGAGTCTG CGCAGCGTCG CGCGAGCTAC GATCAAAGAT
TGGGAGATGA TTGGCCGCGA TCTCGTTTTG GGGTTCGTGA TCGCCGGCGT CGTCGGTGCG
GCGGTGCCCC AGGCGTGGTG GACGGCGCTG TTTGGCAGTC AGTCGACGTT CGTCGGTGTC
CTCACTAACA CCGTCGTCGC GGTCCTGATC GGTATCCTGA CGTTCATGTG TTCGGTCGGC
AACGTCCCGT TCGCACTGGT CCTGTGGCGC AACGGCCTCC CCTTCGGCGG TGTCTTGTCG
TTCATCTACG CCGACCTCCT GATCCCGCCG CTGCTCAGTC TCTACCGGCG ATACTACGGC
TGGCGTATGG CTGCGACACT GTTCGTGACA CTGGCGACCG CCGCGATCGT CGCTGGAGTC
GTTAGTCACT ACGTGCTGAA CGGTCTCGGA ATCGTCCCAC GGCAAGGGAC CGTCGGCGGG
ACCCTCTCGG GCGAGTATAC GACGATACTG AACCTCGTGT TCACGCCGAT CTTTCTGGCC
GAAGTCGTCG GTGCCTACGG GCGAGAGACT GTCGCCGATC GTCTCTCTGA CGGCGTCAGC
GCGATCCGAT CTGTCGTCCA GTTCGCCACG GTCGCACTTT CCGTGGCATA CCTCGCCTTC
GTCTTCGGAC TGTTCGCGAT CGGCGGGTGG CTCTCGGCCG CGAGGACACG AGTCCGGACA
CACACCGACA CTGCAGACAC CGCCGGCCTC GAGACGCTTC CGACCCCACT CCACGACGAC
GACCGCTGGA CGCGACTGTC CGCCTACCTC GAACGAGGCT GGGCACTCCT CCGGCGTGCG
ATCGTCCCAC TCACGGTGGT CGCCCGCCGG CTGTGGCTGC TCGTCGTCTC CGCCGCCGCA
CGTCTCGGTC GCTGGTGGCG GTGGCTCACA CACCGATTCC GGAACGCCCT CGAACGGAGG
TCCTGA
 
Protein sequence
MYIDTLRTAV ALTAEMAWDS WWALVLGLTL SGAVEVFVDR QTMTAVLGGD GVREVSLGAL 
FGAASSSCSY SAVGTTKTLF KKGASAPASL GAFMFASTDL VIELGLAMWV LLGWQFVVGE
YLGGVVAVVV MVLAFTHVVP EAWIERARAH VRRNDEETCP TCDATITDPE NATRERVGGD
LGTYCCGGCL QVARAQSDDE GGAVLTVQSL RSVARATIKD WEMIGRDLVL GFVIAGVVGA
AVPQAWWTAL FGSQSTFVGV LTNTVVAVLI GILTFMCSVG NVPFALVLWR NGLPFGGVLS
FIYADLLIPP LLSLYRRYYG WRMAATLFVT LATAAIVAGV VSHYVLNGLG IVPRQGTVGG
TLSGEYTTIL NLVFTPIFLA EVVGAYGRET VADRLSDGVS AIRSVVQFAT VALSVAYLAF
VFGLFAIGGW LSAARTRVRT HTDTADTAGL ETLPTPLHDD DRWTRLSAYL ERGWALLRRA
IVPLTVVARR LWLLVVSAAA RLGRWWRWLT HRFRNALERR S