Gene Hmuk_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2884 
Symbol 
ID8412436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2764819 
End bp2765937 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID645021230 
ProductPyridoxal-5'-phosphate-dependent protein beta subunit 
Protein accessionYP_003178696 
Protein GI257388923 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGA GTCCGGCCTT TCGCGAGTTC GCCTGTGCAG ACTGTGAGGA GACGTTCGAC 
GCCGACGAGA TCGAACTGCG CTGTCCGGCG TGTGGCGGCC TCCTCGTGGC CCGGTACGAT
CACGATCTCC GTACGGAACC GACGCGGCCG CCGCTCCCGC TGGCCCGCGA GCGCCGCCAC
TCGCTCGACG AGGGTGAGAC GCCCGCGACC GACTGTCCGA CACTGGCCGA CGAGATCGGG
GCCGATCGAC TCCTGCTCAA AGACGAAGGG CGAAATCCGA CCGGCGCGGT GACGGATCGC
GGACTCGCGG TCGCCGTCAG TGCCGGCGCG GCAGTCGGTG CCGACGCCGT TTCGCTCCCG
ACGACCGGCA ACGGCGGTCA GTCGGCGGCT GCCTACGCCG GTCGGGCCGG CGTGACCGCT
CACAGCTACG TCCCCTCGCG GTGTCCGTTC GTCAACAAAG CGATGATCAA CGTCCACGGC
GGAGAGATGA ACGTCGTCGA GGGACGCTAT CCCGACGCGC TGGCGGCCTA CGAGGACAGC
GACGGGGCGC GGTTCCCCGT CGGCCCGTCG TCGCCGTACC GTCGCGCGGG CGTCAAGCGA
CTGGGCTACG AGCTGCTCAC CGGGCCGGCC CCGTCGGCGA TCGTGGTCCC GACCGGCCAC
GGGATCGTCC TCGCCGCGAT CCACACGGCG ATCGAGGAAC TCCGGGAAAC CGGTGCCCTC
GACGTGACGC CGCGTCTCTA CGCCGCACAG CCAGCGGGCT GTGCGCCCAT CGTCGACGCC
TGCGGAACCG CCGACGCGGT CGCGGCCACC GAACAGCCCG ACACGATCGT CGGCCCCCTG
GAAGTCCCCG ATCCCGCCGT CGGCTCTCTC GCCGTCGCGG CCGTCGACGA GACCGGCGGG
CGCGGCGTCG CCGTCTCGGA CAGCGACGCG TTGCAGGCGG CCGTCGACGC GGCCGGCACT
GCCGGCGTCG AACTCAGCGC GACCGGCGGC GTCGCCCTGG CCGGCGCGCG CGAACTCGCC
GCGGAGTTCG AAGGCGAGAC GGTCGCGCTG GTCAACCCCG TCGCAGGCTC GAAAGAGGAC
GACCTGCTTC GCAGCCACCT CATGAGTCAG GGCATCTAG
 
Protein sequence
METSPAFREF ACADCEETFD ADEIELRCPA CGGLLVARYD HDLRTEPTRP PLPLARERRH 
SLDEGETPAT DCPTLADEIG ADRLLLKDEG RNPTGAVTDR GLAVAVSAGA AVGADAVSLP
TTGNGGQSAA AYAGRAGVTA HSYVPSRCPF VNKAMINVHG GEMNVVEGRY PDALAAYEDS
DGARFPVGPS SPYRRAGVKR LGYELLTGPA PSAIVVPTGH GIVLAAIHTA IEELRETGAL
DVTPRLYAAQ PAGCAPIVDA CGTADAVAAT EQPDTIVGPL EVPDPAVGSL AVAAVDETGG
RGVAVSDSDA LQAAVDAAGT AGVELSATGG VALAGARELA AEFEGETVAL VNPVAGSKED
DLLRSHLMSQ GI