| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2838 |
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| Symbol | |
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| ID | 8412389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halomicrobium mukohataei DSM 12286 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013202 |
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| Strand | + |
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| Start bp | 2720110 |
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| End bp | 2721102 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645021183 |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003178650 |
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| Protein GI | 257388877 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.150798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGACA ACTACCACGT CTTTTCCGAC GGACGCATCG AACGCCACGA CGACACGGTA
CGGGTCATCA CCGACGACGG CGAGAAAAAA TACCTCCCGG TCGAGAACGC CGAGGCGATC
TTCCTCCACG GTCAGATCGA GTACAACACC CGCTTCGTCT CCTTTCTCAA TCAGGAAGGC
GTCGCCGTAC ACGTCTTCGG CTGGCACGAT CACTACGCCG GGTCGATCAT GCCCAAGCGG
GGCCAAACGT CCGGACAGAC ACTCGTCGAC CAGGTCCGGG CCTACGACGA TCCGGCCCAC
CGGCTCGAAC TGGCTCAGGC GTTCGTCGAC GGCAGCATCC ACAACATGCG TGCGAACGTC
ACGTACTACG ACGGCCGAGG ACACGACTTC GAGGACGTGC TGGCAGAGCT GACCGAAGCC
CGGTCGTCAC TCGACAGGAT GGAGACGATC GACGAGACGA TGGGCGTCGA AGCACGCGCC
CGAAAGGCGT ACTACTCGAC CTTCGACGAG ATCCTGCCCG ACGAGTTCGT CTTCGGCGGC
CGCCAGTACG ATCCGCCGAA CAACGAAGTC AACAGCCTCA TCTCTTTCGG CAATTCGCTC
GTCTACGCCA ACGTCGTCTC GGCCATCCGA GCGACGGCAC TCGATCCCAC GGTCAGCTTC
CTCCACGAGC CCGGCGAGCG TCGGTACTCG CTGGCCCTGG ACATCGCCGA CCTGTTCAAA
CCGTTGCTCG CGGATCGAGT CATCTTCAGA CTCGTCAACC GCGGCCAGCT GACCAGCGAC
GATTTCGAGG CCGAGATGAA CGCCTGCCTG CTGAACGAGC ACGGCCGGAA GACCTACTCG
AAGGCCTACG AAGAGACGCT CGACGAGACG ATCGAGCACC CGGATCTGGG AAAGAAGGTG
AGCTATCAGT ATCTCCTCCG AGTCGAGGTG TACAAGCTCA AAAAACATCT CCTGACCGGC
GAGGAGTACG TCCCGTTCCA ACGGTGGTGG TGA
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| Protein sequence | MNDNYHVFSD GRIERHDDTV RVITDDGEKK YLPVENAEAI FLHGQIEYNT RFVSFLNQEG
VAVHVFGWHD HYAGSIMPKR GQTSGQTLVD QVRAYDDPAH RLELAQAFVD GSIHNMRANV
TYYDGRGHDF EDVLAELTEA RSSLDRMETI DETMGVEARA RKAYYSTFDE ILPDEFVFGG
RQYDPPNNEV NSLISFGNSL VYANVVSAIR ATALDPTVSF LHEPGERRYS LALDIADLFK
PLLADRVIFR LVNRGQLTSD DFEAEMNACL LNEHGRKTYS KAYEETLDET IEHPDLGKKV
SYQYLLRVEV YKLKKHLLTG EEYVPFQRWW
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