Gene Hmuk_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2728 
Symbol 
ID8412279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2614869 
End bp2617292 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content66% 
IMG OID645021074 
ProductDNA topoisomerase VI subunit B 
Protein accessionYP_003178541 
Protein GI257388768 
COG category[L] Replication, recombination and repair 
COG ID[COG1389] DNA topoisomerase VI, subunit B 
TIGRFAM ID[TIGR01052] DNA topoisomerase VI, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.853166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.559184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGT ATCAGTCTCG CCTCGGGGAA GGAGAAGGGA TCGCCGACGA GCTGGCCGAG 
AGCCAGCGAT CCATCTCCAT CGCCGAGTTC TTCGAGAAGA ACAGGCAGAT GCTCGGGTTC
GACTCGGGGG CCAAGGCGCT CGTCACGGCC GTCAAGGAGG CGGTCGACAA CGCGCTCGAC
GCCTGTGAGG AGGCCGGGAT CACCCCCGAC ATCTACGTCG AAATTCAGGA AGCCGGAGAC
TACTACCGGC TCATCGTCGA AGACAACGGC CCCGGCATCA CCCGAGAACA GATCCCCAAC
ATCTTCGGGA AGCTGCTCTA CGGCTCGCGC TTTCACAAGC GCGAGCAGAA CCGGGGACAG
CAGGGGATCG GTATCTCGGC GGCCGTCCTC CACTCCCAGA AGACCAGCGG CAAGCCGGCG
AAGATCACCA GCCGAACCGA GCAGCACGCA GACGCCCAGT ACTTCGAGCT GATCGTCGAC
ACGGACGCCA ACGAACCCGA GATCAGCGTC GAGGACACGA CGACCTGGGA ACGGCCCCAC
GGCACCCGCA TCGAACTGGA GATGGAGGCG AACATGCGGG CCCGCCAGCA GCTCCACGAC
TACATCAAGC ACACGGCGGT GGTCAACCCC CACGCCCGCA TCGAACTCGT CGAGCCAAAG
GAACACCTCA AGTACGAACG AACGACCGAC CAGCTCCCAG ACGAGACCGA GGAGATCCGT
CCCCACCCCC ACGGCGTCGA ACTCGGCACG CTGCTGAAGA TGCTGGAGTC GACCGACTCG
TACTCCGTCT CCGGGTTCAT GCAGGGCGAG TTCACCCGGG TGGGCCAGAA GACCAGCGAC
GACGTCATCG CGAACTTCAA CGACCGCCAC TACGGCCGCG AGATGTCGTG GTACGGGCCC
CAGAGCCACG AGGACAGCGT TGTCCCGACG GGACAACGAG ATGGAGACGG CGAAGCCGTC
GAAATGGACG TCGCACGCGC GGTCCAGCAG GCCGTCTCGA ACAAGGGCAA AGACGCCACC
GCGGAGTTCG CCGACGCGGT CGCCAGCGCC GTCTCGGAGG CCGGTCGGGT CTCCCACGGT
CGCCTCGAAG CGATCGTCGA CGACCACGCC GACCGGATCG AGGACGACTA CGAGAAGACC
TTCGGCGACA CCGTCCGCGA GGCCGCCATC GAGGCGGCGT GGAGCGAGAT CACCGCCGAT
CGAACGCCGG ACGTGTACGA ACTCGTCGAC GAGGTCACGA CGACGCGAAA GGACGACGCC
GCGGTGCAGG GCATCGCCGA GCGAATCGCG GACAAGTTCG ACGACGGCTC CAACCGCGTC
ACGTACGCAG CGCTCGAAGA CTACGTCGAC CGCGCGGCCG AGATGACCGA GGACATGGAC
GACGCGACCT TCGGCGAGAC CGCCCGCGAG AAGATCGTCG ACGCCCTCTG GGAGGTCGCC
GCGCGGGTCT CCGACGATCC GCCCAACGTC AGCGAGATCG CCGACGACCG GGACACCACC
AGCGACCTGC TGGAGGCGAT GCGCGAGGCC GACATCATCG CGCCGCCGAC GGACTGTCTC
GCGCCGATCA CGGCCGAGCT CGTCGAGGCC GGGCTGAAAA AGGAGTTCGA CGCGGACTTC
TTCGCCGCCT CCACCCGGGA CGCCTCCGTC CACGGCGGCG ACCCGTTCAT CGTCGAGGCC
GGCATCGCCT ACGGCGGCGA CATCGAACAC GATCAGGCGC AGGTGATGCG CTTTGCCAAC
CGCGTCCCGC TCGTGTATCA GCGCGGTGCG TGCGCGACGA CCGACGTGGT CAAGTCCATC
AACTGGCGCA ACTACGGCCT CGACCAGCCG GGGGGTAGCG GCATCCCCAA CGACGCCGCA
GTCGTCATGG TCCACATCGC CTCGACGAAC GTCCCCTTCA CCAGCGAGTC CAAGGACGCC
GTCGCCAACA TCCCGGAGAT CGAGTCCGAG ATCGAGCTGG CGATCCGCGA GGCCGCACGG
GAGCTAAAGA GCTACCTCAA CAAGCGCCGG TCGATGCAAA AGCGCCGGAA GAAAGAGAAC
AAGCTCGCGA CGATCCTCCC CGAGATGGCC GAGAAGCTCG CGACGGTGAC GGGCAACGAG
CGACTGGACA TCGACGACTC GATGGCCCGC ATCATGAACA ACGTCCTCGT CGAGCGCGAG
GTCGAAGGCG ATACGGTCCG GGTCGTCGTC GAGAACAACG ACGACACCAA CGCCGACATC
GACCTGACGG ACATCGTCAC GGCCGAACCG CAGGCCACGA ACGGCGCGAA CGTCGTCGAG
ATGGACGGCG AGTGGTTCGT CAAGTGGCAG ACGACCGTCG CTGCCGGCGA CGACGCAGTC
CTGGAGTATC GGATCGACGG CGACGCCGAA TTCGACATCG CGGTCGACGG CGTCGAAGAC
GAGAAACTGA CGGTGAACGC GTAA
 
Protein sequence
MTSYQSRLGE GEGIADELAE SQRSISIAEF FEKNRQMLGF DSGAKALVTA VKEAVDNALD 
ACEEAGITPD IYVEIQEAGD YYRLIVEDNG PGITREQIPN IFGKLLYGSR FHKREQNRGQ
QGIGISAAVL HSQKTSGKPA KITSRTEQHA DAQYFELIVD TDANEPEISV EDTTTWERPH
GTRIELEMEA NMRARQQLHD YIKHTAVVNP HARIELVEPK EHLKYERTTD QLPDETEEIR
PHPHGVELGT LLKMLESTDS YSVSGFMQGE FTRVGQKTSD DVIANFNDRH YGREMSWYGP
QSHEDSVVPT GQRDGDGEAV EMDVARAVQQ AVSNKGKDAT AEFADAVASA VSEAGRVSHG
RLEAIVDDHA DRIEDDYEKT FGDTVREAAI EAAWSEITAD RTPDVYELVD EVTTTRKDDA
AVQGIAERIA DKFDDGSNRV TYAALEDYVD RAAEMTEDMD DATFGETARE KIVDALWEVA
ARVSDDPPNV SEIADDRDTT SDLLEAMREA DIIAPPTDCL APITAELVEA GLKKEFDADF
FAASTRDASV HGGDPFIVEA GIAYGGDIEH DQAQVMRFAN RVPLVYQRGA CATTDVVKSI
NWRNYGLDQP GGSGIPNDAA VVMVHIASTN VPFTSESKDA VANIPEIESE IELAIREAAR
ELKSYLNKRR SMQKRRKKEN KLATILPEMA EKLATVTGNE RLDIDDSMAR IMNNVLVERE
VEGDTVRVVV ENNDDTNADI DLTDIVTAEP QATNGANVVE MDGEWFVKWQ TTVAAGDDAV
LEYRIDGDAE FDIAVDGVED EKLTVNA