Gene Hmuk_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2608 
Symbol 
ID8412156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2505247 
End bp2506281 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID645020951 
ProductPolyprenyl synthetase 
Protein accessionYP_003178421 
Protein GI257388648 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.879675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.754762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCC AAGAGGACGT CGAGGCGGCG ATCGTCGCCC GCCGCGAGCA GGTCAACGAC 
GCGATCGAGC GAGAACTCCC GGTCGACGAG CCCGAGGAGC TCTACGAGGC GTCACGGTAT
CTGATGGACG CCGGTGGGAA GCGGCTCCGT CCGACGATGT TGCTGCTGGC GGCCGAGTCG
CTCGCCGACG TGGCACCGCA GTCGACGGAC TACCGATCGT TCCCGACGGT CGAGGGCGAC
GAGATCGACG TGATGCGTGC TGCGGTCGGG ATCGAAACGA TTCAGTCCTT TACCCTGATC
CACGACGACA TCATGGACGA CGATGACCTG CGTCGTGGCG TCCCTGCCGT CCATCGCGAA
TACGACCTCT CGACGGCGAT TTTGGCCGGT GACACCCTGT TCTCGAAGGC GTTCGAATAC
ATGCTCGACA CCGGTGCGAA AGCCGAGCGG TCTGTCGCGG CGACGAAACG GCTCGCCCAG
ACCTGTACGG AGATCTGCGA GGGCCAGTCG TTCGACATCG ACTTCGAGAG CCGCGCGGAA
GTGACCACCG ACGAGTACCT CGACATGGTC GAGCTGAAGA CGGCGGTGCT GTACGCGGCC
TCGGCGTCGA TCCCGGCACA GCTGATGGGT GCCGAGGACG CCGTCGAACC GCTCTATGGC
TACGGCCTCG ACGTGGGCCG GGCGTTCCAG ATTCAGGACG ACCTGCTCGA TCTGACGACG
CCCTCGGAGA AGCTGGGCAA GCAGCGCGGC TCCGACCTCG TCGAGGAAAA GCAGACGATC
GTCACGCTCC ACGCCCGCCA GCAGGGCGTC GACATCGAGG GACTCGTCGA GACCGACTCC
GTCGAGGCGG TCACCGAGAG CGAGATCGAC GACGCCGTCG CCGAACTCGA AGCCGCCGGG
AGCATCGAGT TCGCACGGGA GACAGCCCAC GACCTGATCG CGAGCGGGAA AGACCGCCTC
GAAGTGCTGC CGGACAACGA GCCACGTCAG CTACTGGCGG GGATCGCCGA CTACCTCGTC
GAGCGCGAGT ACTGA
 
Protein sequence
MARQEDVEAA IVARREQVND AIERELPVDE PEELYEASRY LMDAGGKRLR PTMLLLAAES 
LADVAPQSTD YRSFPTVEGD EIDVMRAAVG IETIQSFTLI HDDIMDDDDL RRGVPAVHRE
YDLSTAILAG DTLFSKAFEY MLDTGAKAER SVAATKRLAQ TCTEICEGQS FDIDFESRAE
VTTDEYLDMV ELKTAVLYAA SASIPAQLMG AEDAVEPLYG YGLDVGRAFQ IQDDLLDLTT
PSEKLGKQRG SDLVEEKQTI VTLHARQQGV DIEGLVETDS VEAVTESEID DAVAELEAAG
SIEFARETAH DLIASGKDRL EVLPDNEPRQ LLAGIADYLV EREY