Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2608 |
Symbol | |
ID | 8412156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2505247 |
End bp | 2506281 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645020951 |
Product | Polyprenyl synthetase |
Protein accession | YP_003178421 |
Protein GI | 257388648 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.879675 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.754762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC AAGAGGACGT CGAGGCGGCG ATCGTCGCCC GCCGCGAGCA GGTCAACGAC GCGATCGAGC GAGAACTCCC GGTCGACGAG CCCGAGGAGC TCTACGAGGC GTCACGGTAT CTGATGGACG CCGGTGGGAA GCGGCTCCGT CCGACGATGT TGCTGCTGGC GGCCGAGTCG CTCGCCGACG TGGCACCGCA GTCGACGGAC TACCGATCGT TCCCGACGGT CGAGGGCGAC GAGATCGACG TGATGCGTGC TGCGGTCGGG ATCGAAACGA TTCAGTCCTT TACCCTGATC CACGACGACA TCATGGACGA CGATGACCTG CGTCGTGGCG TCCCTGCCGT CCATCGCGAA TACGACCTCT CGACGGCGAT TTTGGCCGGT GACACCCTGT TCTCGAAGGC GTTCGAATAC ATGCTCGACA CCGGTGCGAA AGCCGAGCGG TCTGTCGCGG CGACGAAACG GCTCGCCCAG ACCTGTACGG AGATCTGCGA GGGCCAGTCG TTCGACATCG ACTTCGAGAG CCGCGCGGAA GTGACCACCG ACGAGTACCT CGACATGGTC GAGCTGAAGA CGGCGGTGCT GTACGCGGCC TCGGCGTCGA TCCCGGCACA GCTGATGGGT GCCGAGGACG CCGTCGAACC GCTCTATGGC TACGGCCTCG ACGTGGGCCG GGCGTTCCAG ATTCAGGACG ACCTGCTCGA TCTGACGACG CCCTCGGAGA AGCTGGGCAA GCAGCGCGGC TCCGACCTCG TCGAGGAAAA GCAGACGATC GTCACGCTCC ACGCCCGCCA GCAGGGCGTC GACATCGAGG GACTCGTCGA GACCGACTCC GTCGAGGCGG TCACCGAGAG CGAGATCGAC GACGCCGTCG CCGAACTCGA AGCCGCCGGG AGCATCGAGT TCGCACGGGA GACAGCCCAC GACCTGATCG CGAGCGGGAA AGACCGCCTC GAAGTGCTGC CGGACAACGA GCCACGTCAG CTACTGGCGG GGATCGCCGA CTACCTCGTC GAGCGCGAGT ACTGA
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Protein sequence | MARQEDVEAA IVARREQVND AIERELPVDE PEELYEASRY LMDAGGKRLR PTMLLLAAES LADVAPQSTD YRSFPTVEGD EIDVMRAAVG IETIQSFTLI HDDIMDDDDL RRGVPAVHRE YDLSTAILAG DTLFSKAFEY MLDTGAKAER SVAATKRLAQ TCTEICEGQS FDIDFESRAE VTTDEYLDMV ELKTAVLYAA SASIPAQLMG AEDAVEPLYG YGLDVGRAFQ IQDDLLDLTT PSEKLGKQRG SDLVEEKQTI VTLHARQQGV DIEGLVETDS VEAVTESEID DAVAELEAAG SIEFARETAH DLIASGKDRL EVLPDNEPRQ LLAGIADYLV EREY
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