Gene Hmuk_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2557 
Symbol 
ID8412102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2460370 
End bp2460777 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content57% 
IMG OID645020897 
ProductPilT protein domain protein 
Protein accessionYP_003178370 
Protein GI257388597 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.308124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.19537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTG ATACGAGCTT CGTCCTAGAT GTTATCGGCA ATGTCGAGGC CGCCGTAACG 
AAAGAACGGG AACTCGAAGC AGAGAGCGTC CCGTTAGTAA TCCCGTCAAT GACGGTCTTA
GAACTCTACA TCGGTGTCGG GAAGGTAGCG AACACTCGCC AAGAGCGTCA AGCGGTGGAA
GCTGTACTCG ATTCTTACCC GGTCATAGAT ATGACCCCGA GCATCTCCCG TCGCGCGGGG
CGACTTCTCG GCGAGCGCAT GGCGGAGACA AACGAGGACG AAGGACCTGG AATCGGGAAG
GGAGACGCCA CAATCGCAGC GACGGCTCTG GAGCGTGACG AACCGATTCT CACTGGCGAC
AGCCACTTCG AGAACATCCC GGGTATCACC GTCGAAACGT ACCGGTGA
 
Protein sequence
MIVDTSFVLD VIGNVEAAVT KERELEAESV PLVIPSMTVL ELYIGVGKVA NTRQERQAVE 
AVLDSYPVID MTPSISRRAG RLLGERMAET NEDEGPGIGK GDATIAATAL ERDEPILTGD
SHFENIPGIT VETYR