Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2557 |
Symbol | |
ID | 8412102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 2460370 |
End bp | 2460777 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645020897 |
Product | PilT protein domain protein |
Protein accession | YP_003178370 |
Protein GI | 257388597 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.308124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.19537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTTG ATACGAGCTT CGTCCTAGAT GTTATCGGCA ATGTCGAGGC CGCCGTAACG AAAGAACGGG AACTCGAAGC AGAGAGCGTC CCGTTAGTAA TCCCGTCAAT GACGGTCTTA GAACTCTACA TCGGTGTCGG GAAGGTAGCG AACACTCGCC AAGAGCGTCA AGCGGTGGAA GCTGTACTCG ATTCTTACCC GGTCATAGAT ATGACCCCGA GCATCTCCCG TCGCGCGGGG CGACTTCTCG GCGAGCGCAT GGCGGAGACA AACGAGGACG AAGGACCTGG AATCGGGAAG GGAGACGCCA CAATCGCAGC GACGGCTCTG GAGCGTGACG AACCGATTCT CACTGGCGAC AGCCACTTCG AGAACATCCC GGGTATCACC GTCGAAACGT ACCGGTGA
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Protein sequence | MIVDTSFVLD VIGNVEAAVT KERELEAESV PLVIPSMTVL ELYIGVGKVA NTRQERQAVE AVLDSYPVID MTPSISRRAG RLLGERMAET NEDEGPGIGK GDATIAATAL ERDEPILTGD SHFENIPGIT VETYR
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