Gene Hmuk_2529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2529 
Symbol 
ID8412073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2435167 
End bp2436204 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID645020870 
Productinner-membrane translocator 
Protein accessionYP_003178344 
Protein GI257388571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.658317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.422906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCG CGCTCGAACT GGCCCAGCAG GTCCTCTTGC AGGTGGGTTT CGTCGACGGC 
CTCGCCGAGT TCGTCCGGCC GGGCACGTTC GCTGAGGTCG TCCTCCGGGG GCTCTCGAAG
GCGGCGATCT ACGTCATGAT CGCGGCCGGG CTGACGCTGA TCTTCGGGCT GCTGGGCGTG
CTGAACTTCG CCCACGGTGC GCTGACGATG ATCGGGGCGT ACCTCGGCGG CCTCGTGATG
GTCCTGACGG TGGCACAGGG AACGGGGCCG TGGGCTCGGC TGGCGCTGTT TTTCGTGGCG
ATGGCGGTCG TCTTCGGCTT GCTGTCGGCA CTGGGTGGGT CCATCGAGGT GAGCCTGATC
CGGCCGCTGT ACGATCGGCC GCCGATCTAC CAGATCCTGC TGACCTTCGG CGTGACGCTC
GTGCTCGAAG AGCTGGCCCG GATCGTCGTC GGCTTCTACG GCCTCCAGCC CCTCGCGGAG
TGGCAGGCCG CGCTCGGGAC GATCCCTGCT TTTCTGGAAA CGTCGCAGTC GCTTGGCCCG
GTCTCCGTGC GCGGACTCGC GCTGTTCGAG ATCTTCCTCG GCGCGCTGAC GGTCGCTGCC
ATCTGGGGAT TCCTCACGCG CACGCGCTAC GGCCTGTTCA TCAGGGCCGG GAGCGAGGAC
AGCGAGATGG CGGAGGCGCT CGGCATCGAC GTGCGGCGGG TCTTCACGGT CGTCTTCGCG
CTGGGTGCGG GCGTCGCGGG CGTCGCCGGC ACGCTCCTGA TGTGGGACCC GGTCTGGGGA
GCGAGCGTCC CGCTGGCCGC CGAGTCGCTG TTGCCGGCGT TCGTCGTCGT CATCATCGGC
GGGCTCGGCA CGTTCCGAGG GACGGTCGTG GGTGGGCTGA TCGTCGGCCT CGTCGACGCG
ACGACGACCT GGTGGTTCCA GAACGTCGTC GTCGAGTGGA CCTGGCTCCC GGAGGTCGCC
ATCTTCATGA TCCTCGTCGT GGCGCTGATC GTCCGTCCGC AGGGGATCTA CGGCGTCGAG
GAGGTGGGGG GCCATTAG
 
Protein sequence
MTLALELAQQ VLLQVGFVDG LAEFVRPGTF AEVVLRGLSK AAIYVMIAAG LTLIFGLLGV 
LNFAHGALTM IGAYLGGLVM VLTVAQGTGP WARLALFFVA MAVVFGLLSA LGGSIEVSLI
RPLYDRPPIY QILLTFGVTL VLEELARIVV GFYGLQPLAE WQAALGTIPA FLETSQSLGP
VSVRGLALFE IFLGALTVAA IWGFLTRTRY GLFIRAGSED SEMAEALGID VRRVFTVVFA
LGAGVAGVAG TLLMWDPVWG ASVPLAAESL LPAFVVVIIG GLGTFRGTVV GGLIVGLVDA
TTTWWFQNVV VEWTWLPEVA IFMILVVALI VRPQGIYGVE EVGGH