Gene Hmuk_2477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2477 
Symbol 
ID8412021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2374482 
End bp2375348 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content66% 
IMG OID645020818 
Productinitiation factor 2B related 
Protein accessionYP_003178292 
Protein GI257388519 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.385124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.789729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG AGACCGTCGA GGAGATTTCC GAGATGCAGA CCCACAGCTC CTCCGTCGTC 
GCCGTGAAAG CAGCGAGAGC GCTGTCGGCA CTCGCCGACC GCGAGTTCCC GACCACCGAG
GAGTACGTCC GGGCGCTGGA GCGAAACAGC AGCGCACTTC GACGCGCGAA CCCGTCGCAC
GCGTCGTTGC ACACGACCCA GCGGGCGATC GTCGAGCGCG TCTCCGGGGC GGACCTCGAT
AGCGTCGCGG ACGCGAAAGC CGAGACCGAA GCCGCGATTC AGGCCGTCGT CGAGCAGGTC
GAGGCCGGCA AAGAACGGGC CGCAAAGCGG TGTGGCGACC GCCTCGATCC CACGGCGACG
CTCCTCACGC ACGACTACTC CGCGACCGTG ATCGAGAGTA TCGAGCGTGC GATCGAGACC
GCCGACGGGG AAGTCGACAT GACGGTGTAC GTCACGGAAG CACGCCCCCG ATATCTCGGT
CGCAAGCTGG CTCGATCGAT GGCGGGGATC GACGGCGTCG ACGTGCGCCT GATCGTCGAC
AGCGCCGCCG GCCACTATCT CTCGGAGTGT GATCACGTAC TCGTGGGCAT GGACTGCATC
GTCGACGACA CGCTGTACAA CCGCGTCGGG ACGTACCCGA TCGCGGCGGC CGCCGCCGAT
CAGGGCGTTC CAGTGACCGT CGTCGGATCG GAGTCGAAAC TGATCGACGG CGGCTTCGCG
TTCGAAAACG AGTTCCGGTC GGTCTCGGAG GTGATGCGAG AGCCGGCGGA AGGGTTCTCG
ATCGAGAACC CGGCCTACGA CGCGACGCCG ACGCGTCTCC TCGACAACGT CGTCACGGAC
GAACGCGTCG TGGAATACGA CGAGTGA
 
Protein sequence
MIDETVEEIS EMQTHSSSVV AVKAARALSA LADREFPTTE EYVRALERNS SALRRANPSH 
ASLHTTQRAI VERVSGADLD SVADAKAETE AAIQAVVEQV EAGKERAAKR CGDRLDPTAT
LLTHDYSATV IESIERAIET ADGEVDMTVY VTEARPRYLG RKLARSMAGI DGVDVRLIVD
SAAGHYLSEC DHVLVGMDCI VDDTLYNRVG TYPIAAAAAD QGVPVTVVGS ESKLIDGGFA
FENEFRSVSE VMREPAEGFS IENPAYDATP TRLLDNVVTD ERVVEYDE