Gene Hmuk_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2418 
Symbol 
ID8411962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2317388 
End bp2318659 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content67% 
IMG OID645020761 
Productnucleic acid binding OB-fold tRNA/helicase-type 
Protein accessionYP_003178235 
Protein GI257388462 
COG category[L] Replication, recombination and repair 
COG ID[COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.312206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCG ACGAGCATGC CGAGGAACTC GCCTCCGACC TCGGTGTCGA CAAAGAGGAG 
GTCAAAGAGG ATCTGGCGAA TCTCGTGAAC TACTCCGTCC CGATGGACGA GGCAAAGCAG
AGCCTCAGAC GCAAGTACGG GGACGGCGGC GAGGGCGGGA CGACGCCATC GAGCAAAGAC
ATCGCCGAGA TCTCGGCGAG CGATTCGAAC GTCACCGTCA CGGCCCGAGT GCTGACGGTC
GGCCAGCGGT CGATCCAGTA CCAGGGCGAC GAACAGGTGA TCTTCGAGGG CGAACTCGCC
GACGAGACCG GGACGATCTC GTACACGGCC TGGGAGGACT TCGGACTGGC TGCCGGCGAC
ACGATCACCG CGGGCAACGC GGGTGTCCGC GAGTGGGACG GGCGACCCGA GCTGAACCTC
GGCGAGAGCA CGAGCATCGA GCGATCCGAC GACCCGCTGG ACGTTCCCTA CGAGATCGGC
GGTGACGCCG AACTCGCAAC GCTCGCGCCG GGCGACCGCG GGATCAACGT CGAGGTGCAG
GTCCTGGAGG TCGAGGAGAA GACGATCGAC GGCCGCAACG GCGAGACCGA CATCCTCAGC
GGCGTCTTCG GTGACGAGAG CACCCGGCTC CCGTTTACCG ACTGGGACCC ACACGCCGAG
ATCGAAGCCG GCGCGTCGAT CCGCATCGAA GACGTGTTCG TCCGGGAGTT CCGGGGTGCC
CCGTCGATCA ACGTCTCGGA GTTCTCGGCG GTGACGCCGC TGGACCGCAC GGTCTCGGCG
ACCGAGAACG CACAGCGGAT GCCGATTCGC GAGGCCGTCG ACTCCGGGGG ACTCTTCGAC
GTCGAGCTGA CCGGCAACAT CATCGAAGTC CGGGACGGCT CGGGCCTGAT CGAGCGGTGT
CCGGAGTGTG GCCGCGTCGT CCAGAACGGG CAGTGCCGGA GCCACGGGAC GGTCGACGCC
GTCGACGATC TGCGGACGAA GGCGATCCTC GACGACGGCA GCGGCACCGT GACGGTCGTG
CTCGACGACG AACTGACCGC CGACGTGTAC GGCGGTGACC TCGCGGACGC GACCGAGCAC
GCTCGCGACG CGATGGACAA GGAGGTCGTC GCCGAGCGGA TCGCCGACCG CATCGTCGGC
CTGGAGTACG TCGTCCGCGG CTCGCTGTCG GTCGACGAGT ACGGTGCGAA CCTCGACGCG
ACCAGCTTCG AGGCGAGCGA CGACGACCCG GCAGAACGTG CTCGGACGCT GCTCGCGGAG
GTCGAGCCAT GA
 
Protein sequence
MTLDEHAEEL ASDLGVDKEE VKEDLANLVN YSVPMDEAKQ SLRRKYGDGG EGGTTPSSKD 
IAEISASDSN VTVTARVLTV GQRSIQYQGD EQVIFEGELA DETGTISYTA WEDFGLAAGD
TITAGNAGVR EWDGRPELNL GESTSIERSD DPLDVPYEIG GDAELATLAP GDRGINVEVQ
VLEVEEKTID GRNGETDILS GVFGDESTRL PFTDWDPHAE IEAGASIRIE DVFVREFRGA
PSINVSEFSA VTPLDRTVSA TENAQRMPIR EAVDSGGLFD VELTGNIIEV RDGSGLIERC
PECGRVVQNG QCRSHGTVDA VDDLRTKAIL DDGSGTVTVV LDDELTADVY GGDLADATEH
ARDAMDKEVV AERIADRIVG LEYVVRGSLS VDEYGANLDA TSFEASDDDP AERARTLLAE
VEP