Gene Hmuk_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2412 
Symbol 
ID8411956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp2312911 
End bp2313885 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID645020755 
ProductTranscription factor TFIIB cyclin-related 
Protein accessionYP_003178229 
Protein GI257388456 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.158661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TACACACCCG AACCAACAGC GGCGAACAGC AGACCAGCAC AGAGATCGAG 
ACGGAGGAGG AAAGCGTCGA CGAGAGTCTC TGCCCAGAGT GTGGCGGCCA CACACAGCTC
GACGCGGAAC ACGGCGAGAC GGTGTGTGAA GAGTGCGGAC TGGTCGTCGA GGAAGACGAG
ATCGACCACG GGCCCGAGTG GCGCGCGTTC GACGCCAGCG AGAGAGACAG CAAGTCCCGC
GTCGGTGCGC CGACGACCAA GATGATGCAC GACAAGGGGC TGTCGACCAA CATCGGCTGG
CAGGACAAGG ACGCCTACGG CAACTCCCTG TCCAGCTCCC AGCGCCAGAA GATGCAGCGT
CTGCGCACCT GGAACGAGCG GTTCCGGACA CGCGACTCCA AGGAGCGCAA CCTCAAGCAG
GCGCTTGGCG AGATCGACCG CATGGCCTCG GCGCTCGGAC TCCCCAAGAA CGTCCGCGAG
ACCGCCAGCG TCATCTATCG CCGCGCGCTC GACGAGGACC TGCTGCCCGG CCGCTCCATC
GAGGGCGTCG CCACCTCGGC GCTGTACGCC GCCGCGCGTC AGGCGAACAA CCCCCGGTCA
CTCGACGAGA TGACCCACGT CTCACGCGTC GAACGGATGG AACTCACCCG GACCTACCGC
TACATCATCC GGGAGCTGGG CCTGGAAGTC GCCCCGGCAA AGCCCGAGAG CTACGTCCCG
CGCTTTTGCA GCGAGCTGTC GCTGTCGGAC GAGACCGAGC GACGCGCACG CGAACTGATC
GAAGCCGCTC GCGACGGTGG CATTCTCAGC GGGAAGTCGC CGGTCGGAAT CGCGGCCGCG
GCCGTGTACG CCGCTGCACT GCTGACCAAC GAAAAGGTCA CCCAGAGCGA GGTCAGCGGC
GTCGCGGACA TCTCCGAGGT CACGATCCGC AACCGCTACA AGGAACTGCT CGACGTCGAC
GGCCTCCCGG CGTAA
 
Protein sequence
MSEIHTRTNS GEQQTSTEIE TEEESVDESL CPECGGHTQL DAEHGETVCE ECGLVVEEDE 
IDHGPEWRAF DASERDSKSR VGAPTTKMMH DKGLSTNIGW QDKDAYGNSL SSSQRQKMQR
LRTWNERFRT RDSKERNLKQ ALGEIDRMAS ALGLPKNVRE TASVIYRRAL DEDLLPGRSI
EGVATSALYA AARQANNPRS LDEMTHVSRV ERMELTRTYR YIIRELGLEV APAKPESYVP
RFCSELSLSD ETERRARELI EAARDGGILS GKSPVGIAAA AVYAAALLTN EKVTQSEVSG
VADISEVTIR NRYKELLDVD GLPA