| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2170 |
|---|
| Symbol | |
|---|
| ID | 8411709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 2084234 |
|---|
| End bp | 2086030 |
|---|
| Gene Length | 1797 bp |
|---|
| Protein Length | 598 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645020512 |
|---|
| Product | cytochrome c oxidase, subunit I |
|---|
| Protein accession | YP_003177990 |
|---|
| Protein GI | 257388217 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.535965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAG AGCAGTTAGT ACTGACCGGA CTCATGGCCG TTCTCCTCGT CGTGATCGTC
GGGGCCCTCG CGCGAGCCGA GGACTGGCGG TCGTACACGC CCCTCGCGAG CGGTGGGGGC
TACGGCGAGG CGACGGGACA CGGACACGCA GAGAAACCGG GTGGGCTCGT GCGCTGGCTC
ACGACGGTCG ACCACAAAGA CATCGGGATC CTCTACGGCG TCTACGCCGT GGTTGCCTTC
GCCGTCGGTG GCATCATGGC GATGTTGATC CGGGTGCAGC TGACGCTGCC CGGCGGCGTC
ATCGTCGGGA ACAGCTACTA CAACTCGCTC CTGACGAGCC ACGGGATCAC GATGCTGTTC
CTGTTCGGGA CGCCGATCCT GGCCGCGTTC GCGAACTACT TCGTCCCGCT GTTGATCGGG
GCCGACGACA TGGCGTTCCC GCGGATCAAC GCGATCGCGT TCTGGTTGCT CCCGCCGGCC
GCACTCCTGA TCTGGGCGGG CTTTTTCACC GCGCCGCTGA CGGGCAACGA GATCGAGCCC
GCACAGACGG CCTGGACGAT GTACACGCCG CTGTCGGCCG AACAGGCCAA CCCCGGCGTC
GACCTGATGT TGCTGGGCCT ACACCTCTCC GGGGTCGCAG CGACGATGGG CGCGATCAAC
TTCATCGCGA CCATCTTCAC CGAGCGCGGT GACGGCGTGA ACTGGGCCAA CCTCGACATC
TTCAGCTGGA CGGTCCTCAC CCAGTCGGGA CTGATCCTCT TTGCCTTCCC GCTGCTTGGC
AGCGCGATGA TCATGCTCCT GCTCGACCGG AATCTCGCGA CGACGTTCTT CGCAACCGGG
AACGGCGGGA CGATGCTGTG GCAACACCTG TTCTGGTTCT TCGGCCACCC CGAGGTGTAC
ATCCTCGTGC TCCCGCCGAT GGGACTGGTC AGCTACATCC TCCCGAAGTT CTCCGGCCGG
AAGCTGTTCG GCTTCAAATT CGTCGTCTAC TCCACGCTGG CGATCGGCGT GCTCTCCTTT
GGCGTCTGGG CCCACCACAT GTTCTCGACC GGGATGGACC CGCGGCTGCG CGCCTCCTTC
ATGGCGGTCT CGTTGGCCAT CGCGATCCCC AGCGCCGTCA AGACGTTCAA CTGGATCACG
ACGATGTGGA ACGGACAGCT TCGCCTGACG ACGCCGATGC TGTTCTGTAT CGGCTTCGTC
TCGAACTTCA TCATCGGCGG TGTCACCGGC GTCTTCCTGG CGTCGATCCC CGTCGACCTC
GTGCTCCACG ACACCTACTA CGTGGTCGGT CACTTCCACT ACATCGTGAT GGGTGCGATC
GGCTTCGCCG TCTTCGCCGG CATCTACTAC TGGTTCCCGA TCGTCTCCGG GCGGATGTAC
CAGAAGACGC TCGGAAAGGC CCACTTCTGG CTGTCGATGA TCGGCACCAA CGTCACCTTC
TTCGCGATGC TGGCGCTTGG CTACCTCGGT ATGCCGCGCC GCTACGCGAC CTACAACTTC
GACGGTGCCA TCGCACCGCT CGCGCAGGTG ACGACGTTCC ACCAGCTGGC GACCGTGGGC
GCGTTCATCC TGCTGGTCGG ACAGCTCATC TTCGTCTGGA ACGTCGTGAC CTCCTGGCTC
GAAGGTCGCC GCGTCGAGAG CCACGACCCG TGGAACCTCG AAGAGAACGA CATGCTGGGC
AACGAGTTCA GCTGGTTCAA AGAACAGCGT GAGACCGCCC TCGCCGACGG CGGCGAAGAG
GACGAGTCCG TGATGGCAGA CGGCGGACAG CCCGGCCAGC AGTCGGACGA ACGGTAA
|
|---|
| Protein sequence | MAGEQLVLTG LMAVLLVVIV GALARAEDWR SYTPLASGGG YGEATGHGHA EKPGGLVRWL
TTVDHKDIGI LYGVYAVVAF AVGGIMAMLI RVQLTLPGGV IVGNSYYNSL LTSHGITMLF
LFGTPILAAF ANYFVPLLIG ADDMAFPRIN AIAFWLLPPA ALLIWAGFFT APLTGNEIEP
AQTAWTMYTP LSAEQANPGV DLMLLGLHLS GVAATMGAIN FIATIFTERG DGVNWANLDI
FSWTVLTQSG LILFAFPLLG SAMIMLLLDR NLATTFFATG NGGTMLWQHL FWFFGHPEVY
ILVLPPMGLV SYILPKFSGR KLFGFKFVVY STLAIGVLSF GVWAHHMFST GMDPRLRASF
MAVSLAIAIP SAVKTFNWIT TMWNGQLRLT TPMLFCIGFV SNFIIGGVTG VFLASIPVDL
VLHDTYYVVG HFHYIVMGAI GFAVFAGIYY WFPIVSGRMY QKTLGKAHFW LSMIGTNVTF
FAMLALGYLG MPRRYATYNF DGAIAPLAQV TTFHQLATVG AFILLVGQLI FVWNVVTSWL
EGRRVESHDP WNLEENDMLG NEFSWFKEQR ETALADGGEE DESVMADGGQ PGQQSDER
|
|---|
| |