Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_2083 |
Symbol | |
ID | 8411621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1994494 |
End bp | 1995030 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645020424 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003177903 |
Protein GI | 257388130 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.946947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG ACTACGACGC CGTCGTCTAC GACCTCGATG GCACGCTCGT GCGTCTGGCC GTCGACTGGG ACGCGGTCGC GAGCGACGTC GACGACGTGT TGCGAGAACG CGGCGTCGAC ACGGCGGGCC ACTCGCTGTG GGACATGCTC GAACTCTCGG AGGAGCGGGG CCACCGCGAC GCGGTCGAGT CGGCCATCGC CGATCACGAA CGACCGGGAG CGCGCGACTC GGAGCGACTC CCGCTGCTCG ACGAACTGCC CCTGGACGTT CCCGTCGGCG TGTGTTCGCT CAACTGCGAG GCCGCCTGTC GGATCGCTCT GGAGACTCAC GGCGTCGACG GTCACGTCGA TGCCGTCGTC GGCCGGGACT CCCTGTCGAC GTACAAACCC GATCCGGCCC CGCTCCGGGC GCTGCTTTCG GAGTTCGACG TGTCGCCGTC GGCGGCCCTG TTCGTCGGCG ACTCGGACAG CGACGCGACC GCCGCGCGAC GCGCGTCGAT GGACTTCCAG TGGGTCCGCG AGCGTCACTC CCTGTAG
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Protein sequence | MSADYDAVVY DLDGTLVRLA VDWDAVASDV DDVLRERGVD TAGHSLWDML ELSEERGHRD AVESAIADHE RPGARDSERL PLLDELPLDV PVGVCSLNCE AACRIALETH GVDGHVDAVV GRDSLSTYKP DPAPLRALLS EFDVSPSAAL FVGDSDSDAT AARRASMDFQ WVRERHSL
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