| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_2081 |
|---|
| Symbol | |
|---|
| ID | 8411619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1992780 |
|---|
| End bp | 1993280 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645020422 |
|---|
| Product | DNA binding domain-containing protein |
|---|
| Protein accession | YP_003177901 |
|---|
| Protein GI | 257388128 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAT ACTCGACCGG CAGTGGCAGT GGCAGCGCCG GCGAGAGCTG TGAACTCTGT
GGCGCGTCCG ATGCGGACCT CGAAACGGCG AACGTGGCGG GGGCGACGCT GCAGGTGTGT
GCGGACTGCT CTCAGCACGG CGAGACCTCG AAAACCGAAT CGTCGGACGG TTCTCGTGGT
GACCGAGACA CCGATCGAAA GCGCCGTGCG GCCCAGAACG CGGCCAAGAT GGCCGACGCA
CAGCAGCCCG ACGCCTCCCA CTGGGAGGAC GGCACGAACT ACGAGGACGA TCAGCTCCCG
TATCTCGTCT CCGACTACGG TTCCGTGGTC ACCGAGGCCC GCCAGGACGC GGGCCTCCAG
ACTCAGGAGC TGGCCGAGGA GCTGAGTGTC GACGAATCCG ACGTTCTCGC CGTCGAACAG
GGCCGCGCGA CGCAGGCCGG CGTCGGCGGT TCGGTCGTCG CCAAGCTCGA AGACTTTCTT
GACGTCGAAC TGGCCGAGTG A
|
|---|
| Protein sequence | MAKYSTGSGS GSAGESCELC GASDADLETA NVAGATLQVC ADCSQHGETS KTESSDGSRG
DRDTDRKRRA AQNAAKMADA QQPDASHWED GTNYEDDQLP YLVSDYGSVV TEARQDAGLQ
TQELAEELSV DESDVLAVEQ GRATQAGVGG SVVAKLEDFL DVELAE
|
|---|
| |