Gene Hmuk_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2014 
Symbol 
ID8411545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1914998 
End bp1915921 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content70% 
IMG OID645020348 
ProductUspA domain protein 
Protein accessionYP_003177834 
Protein GI257388061 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.494901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAGG GGCGAGTCTG TCCGAGTGGA AACACCATGT ACGACACCGT TCTGGTCCCG 
ACCGACGGCA GCGACCACGC CGAACGGGCG GGGGCCCACG CCGCGTTCCT CGCGCGGGCG
TTCGACGCGT CGATCCACCT CCTCAACGTC GTCGACCTCC AGGCGGCGGC CGGCCCGATG
AACGCCGGTG GCGTCGACGA GGCCTACGTC GAGCGCCTCG AATCGGAAGG CGAGGCGACG
ATCGGGGCGC TCGAACCGAT CTTCGAGGAT GTCCCGGTCG AGACGGCCGT CGTCCGGGGA
CGGCCCAGCG AAGCGATCCT CGACTACGCC GCGGAACACG ACGCGGATCT GCTGGCGATG
GGGACCCACG GCCGGACTGG TCTCGAACGG TACATCGCCG GGAGCGTCGT CGAACACGTC
GTCCGTCACG CGACCGTCCC GGTCCTGACG ACTCGTGCGG TCGAGACCAG CACCGTCGAC
GACGGCTACG ACGAGATCGT GATCCCGACC GACGGGAGCG AGCCGTCGAC GGCGGCGGTC
GAGCACGGCC TCGCCATCGC CGAGCGGACC GACGCCCGAG TACACGCGAT CAACGTCGTC
AACGTCGCGA CGCTGTCCTC GGGCCCGGAC CAGACCGCGC CCACGGAGCT GCTAGCGGAG
TTCACTGCCC GCGGCGAGCG TGCTACCGAG GAGATCGCGA CGGCCGCGGC CGATCGCGGG
CTCGACGCCA CGACGACGGT CCGCGAGGGA TTCCCGGCCC GAGACATCCT CGACTACGTC
GAAGCGAACG ACGCCGATCT GGTCGCGATG GGGACGGCGG GGCGAAGCGG CCTGAACCGC
TTCCTCCTTG GCAGCACCAC CGAGCGCGTC ATCCGCCACT CCCCGGTACC GGTCTGTGCG
GTCAACGCTC GGGACGCGGA GTGA
 
Protein sequence
MIQGRVCPSG NTMYDTVLVP TDGSDHAERA GAHAAFLARA FDASIHLLNV VDLQAAAGPM 
NAGGVDEAYV ERLESEGEAT IGALEPIFED VPVETAVVRG RPSEAILDYA AEHDADLLAM
GTHGRTGLER YIAGSVVEHV VRHATVPVLT TRAVETSTVD DGYDEIVIPT DGSEPSTAAV
EHGLAIAERT DARVHAINVV NVATLSSGPD QTAPTELLAE FTARGERATE EIATAAADRG
LDATTTVREG FPARDILDYV EANDADLVAM GTAGRSGLNR FLLGSTTERV IRHSPVPVCA
VNARDAE