Gene Hmuk_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_2008 
Symbol 
ID8411539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1910789 
End bp1911709 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID645020342 
Productthioredoxin reductase 
Protein accessionYP_003177828 
Protein GI257388055 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.141519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCA ACTCGAACGA CGCGAACGGA GCGACCGACC GCGAAGTCGT GATCGTCGGC 
GGTGGCCCCG CGGGCTGTTC GGCGGGCGTG TTTACCGCCC GATACGACCT GGATACGGTC
GTGTTCGACC GTGGACGCTC GTCGCTCCGG CGGTGCGCTC ACCTCGAAAA CTACCTCGGC
TTCCCCGCGG GCATGGACAT CGAGACACTC TACGATCTGT TCCACGACCA CGCCCGAGAG
GCCGGCTGTG ACCTCCGTTC GGACCTCGTC GAGTCCGTCG AGCGCCGTGA CGACGACGGC
TTCCTCGTGG AGCTTCAGTC CGGCGACCCG GTCACGACCG ACCGAGTCGT CGCTGCGACG
CGATACGGCG GGGAGTACCT CCTGTCGCTG GACGAGGCCG CGATGGTGAC GACCCGCGAG
CACGACGGCG AGGTACACGA GACCTTCGAC GACACCTATC CCGCGGCGGA CGGGACGACG
CCGATCGACG GGCTGTACGT CGCCTCGCCC TCCGGAGCGT CCCGGCAGGC GATCGTCGCT
GCCGGGCGGG GCGCGCGGAC GGCCCTGAGC GTCGTCGAAG ACGTTCGCCG CGGCCGCGGC
GTTCCCGAGC CGGTCGTCGA TCACTACGAC TGGGTCCGTC GGCGCGCGGA GCTAGACGAG
GAGTGGGACG ATCGGGACCG GTGGCGCGAG TGGTTCGCCC AGCGGCTTCC GGACGAGCTC
GATCCCGAAT CGCCGGCACT GGCGTCCGTT CGCGAGTCCG AGATCGATCG GGTGTTCGAG
AGCTACGTCG ACGAAGACGA GATCGAGCGA CGGCGCGAAC GCGGCCAACA ACGACTCCTC
GATCACGTCG ACGACGATCT GATCGTCGAA CGGGCCCGTG TCATCGAGGA CCGAACTGCG
CCAGAGCGTG CCGACGACTG A
 
Protein sequence
MARNSNDANG ATDREVVIVG GGPAGCSAGV FTARYDLDTV VFDRGRSSLR RCAHLENYLG 
FPAGMDIETL YDLFHDHARE AGCDLRSDLV ESVERRDDDG FLVELQSGDP VTTDRVVAAT
RYGGEYLLSL DEAAMVTTRE HDGEVHETFD DTYPAADGTT PIDGLYVASP SGASRQAIVA
AGRGARTALS VVEDVRRGRG VPEPVVDHYD WVRRRAELDE EWDDRDRWRE WFAQRLPDEL
DPESPALASV RESEIDRVFE SYVDEDEIER RRERGQQRLL DHVDDDLIVE RARVIEDRTA
PERADD