Gene Hmuk_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1879 
Symbol 
ID8411406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1789649 
End bp1790107 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content69% 
IMG OID645020210 
Productprotein of unknown function DUF88 
Protein accessionYP_003177700 
Protein GI257387927 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00288] conserved hypothetical protein TIGR00288 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.201136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGG TGAGCCGGCT CCTCGGGGGC GGCGACGACG CGAGCGAGCC GCGGGTGGGA 
GTGTTCGTCG ACGGGCCGAA CGTGCTGCGC AGCGAGTTCG ACGTGGACCT CGACGACGTG
CGCGAGGAAG CCGAAAACTG GGGGCGGCTG GCGATAACGC GGCTCTACGT GGACGAACAC
GCCACGCCGG GCCTGATTCA GGCCGCGGAG GCGCGTGGCT TCGAGGTCGT CGTCACCAGC
GGCGACGTGG ACGTGAAGCT GGCCGTCGAC GCCACCGCCG CCGGAGCCGA CGACGCGATC
GATCTGCTGG CGATCGTCTC GCGAGACACC GACTTCAAGC CCGTCCTGGA GAGTGTCGGC
GAGCGGGGCA TCGAGACGCT GGCGATCGCG CCGGGCGAAC ACGGCCGCTC GGATGCACTT
CGCAACGCCG CTCAGAACGC GACGACGCTC GAAGAGTAG
 
Protein sequence
MKLVSRLLGG GDDASEPRVG VFVDGPNVLR SEFDVDLDDV REEAENWGRL AITRLYVDEH 
ATPGLIQAAE ARGFEVVVTS GDVDVKLAVD ATAAGADDAI DLLAIVSRDT DFKPVLESVG
ERGIETLAIA PGEHGRSDAL RNAAQNATTL EE