Gene Hmuk_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1849 
Symbol 
ID8411376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1758777 
End bp1759241 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID645020180 
Productribosomal protein L30P 
Protein accessionYP_003177670 
Protein GI257387897 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01309] 50S ribosomal protein L30P, archaeal 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.685217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAC TCGTTCAGCT CCGCGGTGAG GTCGACATGA GCGAGGAGGT ATCGGACACG 
CTGGAGATGC TCAACATCCA CGGCGTGAAC CACTGCGTGC TGGTCCCCGA GACGGACACC
TACCGTGGCA TGGTGACGAA GGTCAACGAC TTCGTCGCCC ACGGTCAGCC GAGCGTCGAC
GTCGTCGAGA CGCTGCTCGC AAAGCGAGCA GAACCCCTCG AAGGGTCGGC CGACGTCGAC
GACGAGTGGA TCGCCGAGCA GACCGACTAC GACGATCTCG GTGCGCTCGC GCAGGCCCTC
GTCGACGAGG AGACGACGCT CCGCGACGAG GGGCTCTCCC CGACGCTCCG CCTGCACCCG
CCCCGTGGCG GCCACGACGG GCTCAAACAC GCCGCCACCG AGAGCGGCCA GCTCGGGAAG
CACGACTCCG AGCAGATCGA TCAGCTACTG GAGGCGATGC GATAA
 
Protein sequence
MKALVQLRGE VDMSEEVSDT LEMLNIHGVN HCVLVPETDT YRGMVTKVND FVAHGQPSVD 
VVETLLAKRA EPLEGSADVD DEWIAEQTDY DDLGALAQAL VDEETTLRDE GLSPTLRLHP
PRGGHDGLKH AATESGQLGK HDSEQIDQLL EAMR