Gene Hmuk_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1820 
Symbol 
ID8411346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1739626 
End bp1740261 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content62% 
IMG OID645020150 
Productresponse regulator receiver protein 
Protein accessionYP_003177641 
Protein GI257387868 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGAGTG GGCGCTGTAT CGACTCCTCG TACCGTTCCA ATAAGTATAG GTTATTGGGC 
ACGAAAGTCG CCCTCGTGAG GGGTGTTTCA GACGACGTTG CGGTGCTCGT CCTCGAAGAC
GAGACCGAAC TACTGGACGC GTACGTCAAC GGGCTCGAAG ACGAGTACGA CGTGTACGCA
GCCGAGACCG CGGCGACTGC GACGGACCAC GTGGACGGTC TCGGCGACGA TCTCGACGTG
GCCCTCCTCG ATCGCCGGCT CCCCGAACGG TCCGGCGACG ACGTTCTGAA GTACATCCAG
TCGGCACCCA TCGACTGTCG AACGGCTATG GTGACCGCCG TCGACCCGTC GCTCGACATC
ATCGACATGG GGTTCGACGA CTACGTGGTC AAACCGGTCA CGCCGTCCGA CCTTCGGACG
GTGATCGACC GACTGTTGAA ACTAGAAGCG TACGACGACG TCTACCAGAC GCTGAGCGAG
AAACGCGTCA AGCGGAGCGT CCTCGCGGCC GAACTGTCTC GCACGGAACT CGAACGCAGC
GAGGAGTTCG CCGCGCTACA GTCCGAGATT GCCGATCTCG AAGCCCAACT CGAATCGATC
GAGTCGGAGA TCGACGACGA GGCCCTCCCG CACTGA
 
Protein sequence
MTSGRCIDSS YRSNKYRLLG TKVALVRGVS DDVAVLVLED ETELLDAYVN GLEDEYDVYA 
AETAATATDH VDGLGDDLDV ALLDRRLPER SGDDVLKYIQ SAPIDCRTAM VTAVDPSLDI
IDMGFDDYVV KPVTPSDLRT VIDRLLKLEA YDDVYQTLSE KRVKRSVLAA ELSRTELERS
EEFAALQSEI ADLEAQLESI ESEIDDEALP H