| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1666 |
|---|
| Symbol | |
|---|
| ID | 8411189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1590720 |
|---|
| End bp | 1591349 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645019993 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003177487 |
|---|
| Protein GI | 257387714 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.40268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCAG AGACGCCCTT CCCGGGCGAC CCCGACGACT CGCGGGAGGC GATCATGCGT
GCGACGTACT GTGCGCTGAA GCAGTACGGC TACGCCGGGC TCTCGATCCA GCGGATCGCC
GACGAGGCGG ATCTGAGCAA GTCGACGTTC TACCACCACT ACGACGACAA ACACGATCTG
TTGACCTCGT TCGTCGACTT CATCCTCGCG GAGTTCACCC GCGTGTTCTC ACTGGAGGCC
GGCGACGGTC CGGAAGCGAA CCTCCGGACG TTCGTTCGTC TCATTCTCGA CCCGACGACC
GCCGAGAAGG TCTCCGAGGA ATCGCCCGCG TCGACAGTGC TGGGCACCTA CGTCGAACTG
CGCGCACAGG CCGTCCAGGA CGAGACGATC CGCGAGAAGT TCACCGAGGT CGACCGCAGC
TTCGAGGACC AGATCGCGGA GATCGTCGAA AACGGCGTCG CGTCCGGCGT GTTCAGGGAC
GTGGACCCGG AACAGACCGC GACGTTCGTC TCGACGCTCG TCGCCGGACA GACGTTCCGA
CAGTCGACCA GAGACGACGA CCCCTCGGAG GCAGTGCTGG CTGCCTTCGA CGACTACGTA
CGGGAATCGC TGCTCCGAGA CGACGCCTGA
|
|---|
| Protein sequence | MAPETPFPGD PDDSREAIMR ATYCALKQYG YAGLSIQRIA DEADLSKSTF YHHYDDKHDL
LTSFVDFILA EFTRVFSLEA GDGPEANLRT FVRLILDPTT AEKVSEESPA STVLGTYVEL
RAQAVQDETI REKFTEVDRS FEDQIAEIVE NGVASGVFRD VDPEQTATFV STLVAGQTFR
QSTRDDDPSE AVLAAFDDYV RESLLRDDA
|
|---|
| |