Gene Hmuk_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1619 
Symbol 
ID8411142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1539639 
End bp1540931 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID645019946 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003177440 
Protein GI257387667 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00015243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.333311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGATG TCGGCGGTTC GATCGGGCTG TTGCGCGACC GGGAGTTCGC CGCGCTCGCC 
GGGACCGCGT TCGCGAGGAG CCAGGCGTAC TCGACGATCA TCATCGCCCT CGCGCTGTAC
GCCGACCTGT TCGGCACGAC CGGGACCGTC GAGGGGCTGT TCGGAACCGG TTTCGCGCTC
GTCCAGTTGC TCGTCGTCTT GCCGCTGGGT CGACGCATCG ACCTGGGCGA CTCGAAGCGG
TACCTGCTCG TCGGCTTTCT CCTCAATCTC GTCGTGTTCG CGGGGTTCGT CTTCGTCGAG
AACGCGATCC ACATCGTCCT GATCCGGATG GTCCAGGGGC TGGGTGCGTC GCTCCTGTGG
ATCACCGGCT CGACGATCGT CGGCGAGATC AGCCCCGACG GCGAGCGGGG CCAGTGGCTC
GGCGCGTACA ATCAGTTCGG CTCGATCTCG TCGCTGGCGG GCGACCTCGT GGGCGGGTAC
CTCCTCTTTG CCTACGGCTT CACGCTCACT TACGCCGTCC TCGCCGGGGT CACGCTCGTG
GCCTTCGCGC TCGTGTTCCT GTACCTCCGG GACAACCCCG GCGGTCGGAA AGATCCCGAC
GAGGCCGGCG GCATCGAGAC CTTCCGCCAG CTGCTGGGCC GGCGGATGCT GCGCGCGCTC
GTCGTCTTTC GTTTCACGTT CAGTGTCGGG AAGATGGCCG TCATCATCTT CCTCCCGATC
TACGCCCGGA CGAGCTTCGG CATCTCCGCG TTCGCCATCG GGTGGATCAT GGCCGGCGGG
AAGCTGACGA AGGCGATCAC ACAGGGGTAC GTCGGTGACC TGACCGACCG ACTCGGTCGC
CACCACTACT TCGTCGCCGT CGGTGCCGGG CTGTACGGCG TCGGGACCGC GCTGATTCCG
CTGGCAGCCT ACTTCGAGGG GACCGTGACG CCGATCGAGT TCACGGCCTT CGGCGGCACT
CAGGCGCTGG GCGGGGCCTT CTTCGCCCTC TTTGGCGCGT TCTCGATCCT GGGGCTCGCC
GACAGTCTCC GCCTGCCGGC GAGCATGGCG CTGTTCGTCG AGGAGGCCGA GGCCTACGAC
GCCGTCGCCT CCAGTTTCTC CCTGCGCTCG ATCTCCTGGA AGGTCGGGCA GGTGACGGGT
CCGGTCCTGA TCGGCGCGAT CAAGGACCTC GTCTCTCCCG AAGCCGCGTT TCTCGCCGCC
GCGGGGTTCC TCGGCTTCGC AACGGTCGTC TTCGTCGGGA TGAGCGTCCG GGCGCGGCGA
GCCCAGACCC CGGTGGCGAC CCCCGGCGAC TGA
 
Protein sequence
MVDVGGSIGL LRDREFAALA GTAFARSQAY STIIIALALY ADLFGTTGTV EGLFGTGFAL 
VQLLVVLPLG RRIDLGDSKR YLLVGFLLNL VVFAGFVFVE NAIHIVLIRM VQGLGASLLW
ITGSTIVGEI SPDGERGQWL GAYNQFGSIS SLAGDLVGGY LLFAYGFTLT YAVLAGVTLV
AFALVFLYLR DNPGGRKDPD EAGGIETFRQ LLGRRMLRAL VVFRFTFSVG KMAVIIFLPI
YARTSFGISA FAIGWIMAGG KLTKAITQGY VGDLTDRLGR HHYFVAVGAG LYGVGTALIP
LAAYFEGTVT PIEFTAFGGT QALGGAFFAL FGAFSILGLA DSLRLPASMA LFVEEAEAYD
AVASSFSLRS ISWKVGQVTG PVLIGAIKDL VSPEAAFLAA AGFLGFATVV FVGMSVRARR
AQTPVATPGD