Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1619 |
Symbol | |
ID | 8411142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1539639 |
End bp | 1540931 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 645019946 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003177440 |
Protein GI | 257387667 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00015243 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.333311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGATG TCGGCGGTTC GATCGGGCTG TTGCGCGACC GGGAGTTCGC CGCGCTCGCC GGGACCGCGT TCGCGAGGAG CCAGGCGTAC TCGACGATCA TCATCGCCCT CGCGCTGTAC GCCGACCTGT TCGGCACGAC CGGGACCGTC GAGGGGCTGT TCGGAACCGG TTTCGCGCTC GTCCAGTTGC TCGTCGTCTT GCCGCTGGGT CGACGCATCG ACCTGGGCGA CTCGAAGCGG TACCTGCTCG TCGGCTTTCT CCTCAATCTC GTCGTGTTCG CGGGGTTCGT CTTCGTCGAG AACGCGATCC ACATCGTCCT GATCCGGATG GTCCAGGGGC TGGGTGCGTC GCTCCTGTGG ATCACCGGCT CGACGATCGT CGGCGAGATC AGCCCCGACG GCGAGCGGGG CCAGTGGCTC GGCGCGTACA ATCAGTTCGG CTCGATCTCG TCGCTGGCGG GCGACCTCGT GGGCGGGTAC CTCCTCTTTG CCTACGGCTT CACGCTCACT TACGCCGTCC TCGCCGGGGT CACGCTCGTG GCCTTCGCGC TCGTGTTCCT GTACCTCCGG GACAACCCCG GCGGTCGGAA AGATCCCGAC GAGGCCGGCG GCATCGAGAC CTTCCGCCAG CTGCTGGGCC GGCGGATGCT GCGCGCGCTC GTCGTCTTTC GTTTCACGTT CAGTGTCGGG AAGATGGCCG TCATCATCTT CCTCCCGATC TACGCCCGGA CGAGCTTCGG CATCTCCGCG TTCGCCATCG GGTGGATCAT GGCCGGCGGG AAGCTGACGA AGGCGATCAC ACAGGGGTAC GTCGGTGACC TGACCGACCG ACTCGGTCGC CACCACTACT TCGTCGCCGT CGGTGCCGGG CTGTACGGCG TCGGGACCGC GCTGATTCCG CTGGCAGCCT ACTTCGAGGG GACCGTGACG CCGATCGAGT TCACGGCCTT CGGCGGCACT CAGGCGCTGG GCGGGGCCTT CTTCGCCCTC TTTGGCGCGT TCTCGATCCT GGGGCTCGCC GACAGTCTCC GCCTGCCGGC GAGCATGGCG CTGTTCGTCG AGGAGGCCGA GGCCTACGAC GCCGTCGCCT CCAGTTTCTC CCTGCGCTCG ATCTCCTGGA AGGTCGGGCA GGTGACGGGT CCGGTCCTGA TCGGCGCGAT CAAGGACCTC GTCTCTCCCG AAGCCGCGTT TCTCGCCGCC GCGGGGTTCC TCGGCTTCGC AACGGTCGTC TTCGTCGGGA TGAGCGTCCG GGCGCGGCGA GCCCAGACCC CGGTGGCGAC CCCCGGCGAC TGA
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Protein sequence | MVDVGGSIGL LRDREFAALA GTAFARSQAY STIIIALALY ADLFGTTGTV EGLFGTGFAL VQLLVVLPLG RRIDLGDSKR YLLVGFLLNL VVFAGFVFVE NAIHIVLIRM VQGLGASLLW ITGSTIVGEI SPDGERGQWL GAYNQFGSIS SLAGDLVGGY LLFAYGFTLT YAVLAGVTLV AFALVFLYLR DNPGGRKDPD EAGGIETFRQ LLGRRMLRAL VVFRFTFSVG KMAVIIFLPI YARTSFGISA FAIGWIMAGG KLTKAITQGY VGDLTDRLGR HHYFVAVGAG LYGVGTALIP LAAYFEGTVT PIEFTAFGGT QALGGAFFAL FGAFSILGLA DSLRLPASMA LFVEEAEAYD AVASSFSLRS ISWKVGQVTG PVLIGAIKDL VSPEAAFLAA AGFLGFATVV FVGMSVRARR AQTPVATPGD
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