| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1521 |
|---|
| Symbol | |
|---|
| ID | 8411042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1447238 |
|---|
| End bp | 1448500 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645019847 |
|---|
| Product | MiaB-like tRNA modifying enzyme |
|---|
| Protein accession | YP_003177343 |
|---|
| Protein GI | 257387570 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAGT ATCACATCGA GACGTACGGG TGTACGTCAA ACCGCGGCGA GACCCAGGAG
ATCGAGCAGG CGCTTCGCGA GGGGGGCCAC TACCCCGCCG ACGGGCCCGA GGAGGCCGAC
GTGGCGATCC TCAACACCTG TACCGTCCTC GAGAAAACGG AGCGCAACAT GCTTCGACGG
GCCGAGGAAC TCGACGCGGA GACGCCCGGA GATCTGGTCG TCACCGGCTG TATGGCGCTG
GCACAGGGCG AGGAGTTCCG CGCGGCCGAC GTTGACGCCG AGGTGCTCCA CTGGGACGAC
GTGCCCCAGC ACGTCCTCAA CGGCGAGTGT CCGACGGTCA CGCCCGATAC GGAGACCGTG
CTCGACGGCG TCGTCGGCAT CCTGCCGATC GCGCGTGGCT GTATGTCCGA CTGTTCCTAC
TGTATCACCA AGCAGGCGAC CGGTCGGATC GAGTCGCCGT CGGTCGAGGA AAACGTCGAG
AAGGCCCGAG CGCTGGTCCA CGCCGGTGCG AAGGAGCTCC GCGTCACGGG CCAGGACACC
GGCGTCTACG GCTGGGACAC CAATCAGGGC GAGAGCCTGC TGCCCGAGCT GCTAGAGCGG
ATCTGCACCG AGATCGACGG CGAGTTCCGG GTCCGGGTGG GGATGGCCAA CCCGAAGGGC
GTCCACGGCG TCCGCGAGGA GCTGGCCCGC GTCTTCGCCG AGCACGACGA GCTGTACAAC
TTCCTGCACG CGCCGGTCCA GTCCGGCAGC GACGACGTGC TCGCGGACAT GCGCCGCCAG
CACGCCGTGG GCGAGTACGT CGCGGTCGTC GACACCTTCG ACGAGTACCT GGACTACTGG
ACGCTGTCGA CCGACTTCAT CGTCGGCTTC CCCAGCGAGA CGGAATCTGA CTTCCAGCAG
TCGATGGCGC TACTGCGCGA GACCCGCCCG GAGAAGATCA ACGTCACCCG CTTCTCGAAG
CGTCCCGGCA CGGACGCCGC CGACATGAAG GGGCTGGGCG GCCAGATCAA GAAGGACCGC
TCGAAGGCGA TGTCCGAGCT GAAGATGGAC GTGACCGGCG ACGCCTACGA AGCCATGCTC
GGCGAGCAAA AGCGGGTCCT CCTGACCGAA GACGGCACCG ACGACTCGCT GGTGGGCTAC
GACGAGGCGT ACCGACAGGT CGTCGTCGTC GACGCACAGC AGCGCGGGCT CGAAGTCGGC
GACTTCGTCG ACTGCGAGAT CACCAGTCAC AACACCGTCT ACGCGTTCGG CGAACCGATA
TAA
|
|---|
| Protein sequence | MAQYHIETYG CTSNRGETQE IEQALREGGH YPADGPEEAD VAILNTCTVL EKTERNMLRR
AEELDAETPG DLVVTGCMAL AQGEEFRAAD VDAEVLHWDD VPQHVLNGEC PTVTPDTETV
LDGVVGILPI ARGCMSDCSY CITKQATGRI ESPSVEENVE KARALVHAGA KELRVTGQDT
GVYGWDTNQG ESLLPELLER ICTEIDGEFR VRVGMANPKG VHGVREELAR VFAEHDELYN
FLHAPVQSGS DDVLADMRRQ HAVGEYVAVV DTFDEYLDYW TLSTDFIVGF PSETESDFQQ
SMALLRETRP EKINVTRFSK RPGTDAADMK GLGGQIKKDR SKAMSELKMD VTGDAYEAML
GEQKRVLLTE DGTDDSLVGY DEAYRQVVVV DAQQRGLEVG DFVDCEITSH NTVYAFGEPI
|
|---|
| |