Gene Hmuk_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1372 
Symbol 
ID8410892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1297554 
End bp1298735 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content59% 
IMG OID645019703 
Productchitin-binding domain 3 protein 
Protein accessionYP_003177200 
Protein GI257387427 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.507673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGAAG ATCCGGTAAT ACACAAACGA GTTGCGGGGA GTAGCCTACC ACGTGTCACC 
AAGTCACGTG TCGCAAAGAC GGGGGTACTG ATCCTCTTTT TGACGGTTCT CGGCCTCGTT
GCGGTACAGA CGGCCGCCGC CCATGGAGCA CCGTCGGATC CAATTGGCCA GGGGTTGGCC
TGTTACGAGG AGGTCAAGAA TGAGGGAGAG ACAAACGAGA TGTGTGAGTT TGCACGCGAG
CAGAGCGGAC AGGCAATCTA CAACTGGCAG GGAATTCGCG ACGGTGATGC GGGCGGCGAT
CACCAGGAGA ACATCGATGA CGGTGAACTC TGTAGTGCCG GAAGCGAAAG ATACGCTCCG
TACGATGAGC CTGGAGACTG GCCTTCGACG ACGATCGAGC CCGGTACGCA GACGTTTACT
CTCGATCTGA CCGCGCCACA CGAAGCCGAG TACTTCAGGT TCTACATGAC CAAGGATGGA
TGGAATCCAG ACACCGCGCT TGCGTGGGAC GACCTAGAAC AGATCCACGA AACGGGTCCA
ATGAGTCCCA CTGAAACGAC GGAGATCAGT GGTGTGGACG TCCCCGACCG CGATAACAAG
GAACACGTCA TCTACATGGT CTGGCAGCGA TCCGATTCGC CAGAAGCGTT CTATTCGTGC
TCCTATGTTG ACATTGCCGG CGCTGATGAT GGCAACGATG ATACGCCAGA TCAGCCCGAC
ACGCCAACTG ACACGCCAGA TCAGCCCGAC ACGCCAACTG ACACGCCAGA TCAGCCCGAC
ACGCCAACTG ACACGCCAGA TCAGCCCGAC ACGCCAGATC AGCCGGACGT GCCCGCGTGG
GACTCCGGAG CCACGTACAC GAGCGGCGAC CAGGTGACCT ACAACGGCAA AACGTGGGAG
GCCAACTGGT GGACGCAGGG TGACGAACCC GGTTCCTCCG AGTGGGGTCC CTGGGAGCAG
GTCTCAGGCG ATGACACGCC AGATCAGCCC GACACGCCAA CTGACACGCC AGATCAGCCC
GACACACCCG ATCAGCCGGA CGTGCCCAAG TGGAATTCGA GTACGGCCTA CACAAGTGGA
GATCAGGTGA GCTATGACGG CGAAACGTGG GAAGCCAACT GGTGGACTCA GGGTGACGAA
CCCGGTAGCT CCCAGTGGGG GCCGTGGGAA CGAGTAGAGT AG
 
Protein sequence
MGEDPVIHKR VAGSSLPRVT KSRVAKTGVL ILFLTVLGLV AVQTAAAHGA PSDPIGQGLA 
CYEEVKNEGE TNEMCEFARE QSGQAIYNWQ GIRDGDAGGD HQENIDDGEL CSAGSERYAP
YDEPGDWPST TIEPGTQTFT LDLTAPHEAE YFRFYMTKDG WNPDTALAWD DLEQIHETGP
MSPTETTEIS GVDVPDRDNK EHVIYMVWQR SDSPEAFYSC SYVDIAGADD GNDDTPDQPD
TPTDTPDQPD TPTDTPDQPD TPTDTPDQPD TPDQPDVPAW DSGATYTSGD QVTYNGKTWE
ANWWTQGDEP GSSEWGPWEQ VSGDDTPDQP DTPTDTPDQP DTPDQPDVPK WNSSTAYTSG
DQVSYDGETW EANWWTQGDE PGSSQWGPWE RVE