Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1372 |
Symbol | |
ID | 8410892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1297554 |
End bp | 1298735 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645019703 |
Product | chitin-binding domain 3 protein |
Protein accession | YP_003177200 |
Protein GI | 257387427 |
COG category | [S] Function unknown |
COG ID | [COG3397] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.507673 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGAAG ATCCGGTAAT ACACAAACGA GTTGCGGGGA GTAGCCTACC ACGTGTCACC AAGTCACGTG TCGCAAAGAC GGGGGTACTG ATCCTCTTTT TGACGGTTCT CGGCCTCGTT GCGGTACAGA CGGCCGCCGC CCATGGAGCA CCGTCGGATC CAATTGGCCA GGGGTTGGCC TGTTACGAGG AGGTCAAGAA TGAGGGAGAG ACAAACGAGA TGTGTGAGTT TGCACGCGAG CAGAGCGGAC AGGCAATCTA CAACTGGCAG GGAATTCGCG ACGGTGATGC GGGCGGCGAT CACCAGGAGA ACATCGATGA CGGTGAACTC TGTAGTGCCG GAAGCGAAAG ATACGCTCCG TACGATGAGC CTGGAGACTG GCCTTCGACG ACGATCGAGC CCGGTACGCA GACGTTTACT CTCGATCTGA CCGCGCCACA CGAAGCCGAG TACTTCAGGT TCTACATGAC CAAGGATGGA TGGAATCCAG ACACCGCGCT TGCGTGGGAC GACCTAGAAC AGATCCACGA AACGGGTCCA ATGAGTCCCA CTGAAACGAC GGAGATCAGT GGTGTGGACG TCCCCGACCG CGATAACAAG GAACACGTCA TCTACATGGT CTGGCAGCGA TCCGATTCGC CAGAAGCGTT CTATTCGTGC TCCTATGTTG ACATTGCCGG CGCTGATGAT GGCAACGATG ATACGCCAGA TCAGCCCGAC ACGCCAACTG ACACGCCAGA TCAGCCCGAC ACGCCAACTG ACACGCCAGA TCAGCCCGAC ACGCCAACTG ACACGCCAGA TCAGCCCGAC ACGCCAGATC AGCCGGACGT GCCCGCGTGG GACTCCGGAG CCACGTACAC GAGCGGCGAC CAGGTGACCT ACAACGGCAA AACGTGGGAG GCCAACTGGT GGACGCAGGG TGACGAACCC GGTTCCTCCG AGTGGGGTCC CTGGGAGCAG GTCTCAGGCG ATGACACGCC AGATCAGCCC GACACGCCAA CTGACACGCC AGATCAGCCC GACACACCCG ATCAGCCGGA CGTGCCCAAG TGGAATTCGA GTACGGCCTA CACAAGTGGA GATCAGGTGA GCTATGACGG CGAAACGTGG GAAGCCAACT GGTGGACTCA GGGTGACGAA CCCGGTAGCT CCCAGTGGGG GCCGTGGGAA CGAGTAGAGT AG
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Protein sequence | MGEDPVIHKR VAGSSLPRVT KSRVAKTGVL ILFLTVLGLV AVQTAAAHGA PSDPIGQGLA CYEEVKNEGE TNEMCEFARE QSGQAIYNWQ GIRDGDAGGD HQENIDDGEL CSAGSERYAP YDEPGDWPST TIEPGTQTFT LDLTAPHEAE YFRFYMTKDG WNPDTALAWD DLEQIHETGP MSPTETTEIS GVDVPDRDNK EHVIYMVWQR SDSPEAFYSC SYVDIAGADD GNDDTPDQPD TPTDTPDQPD TPTDTPDQPD TPTDTPDQPD TPDQPDVPAW DSGATYTSGD QVTYNGKTWE ANWWTQGDEP GSSEWGPWEQ VSGDDTPDQP DTPTDTPDQP DTPDQPDVPK WNSSTAYTSG DQVSYDGETW EANWWTQGDE PGSSQWGPWE RVE
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