Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1352 |
Symbol | |
ID | 8410872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | - |
Start bp | 1277310 |
End bp | 1278230 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645019683 |
Product | HTH DNA-binding protein |
Protein accession | YP_003177180 |
Protein GI | 257387407 |
COG category | [S] Function unknown |
COG ID | [COG1992] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.111494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGG TCTTGCCGAG CGAGATCGTC GTCGAGGAGG TCCTCCCGCG GGTCCGCGCG ATGCTCGCAC GCGAACTCGC CGACGAGGGA TTGACACAGC AGGCCGTCGC CGACCACCTC GGCGTGACCC AGGCCGCAGT GAGTACGTAT CTGGACGGCG AACTCGACCG AACGGGACCA GTCGCGGGCG ATCCACGGAC ACAGGCGACC GTCGAGGAGA TCGCCGCCGG GCTGGCGAGT GGATCGATGG ACGGCTACGA CGCGCTGGCC GAGTTGCTCG ACCTGATCGC CGCGTTCGAG GATCGCGGAC CGATCTGTAC GCTCCACGAG GACGCGATGC CGGCCCTGCG GGGACTGGGC TGTGACCTCT GTGTCCGGGG CGACGACCCC GCGCTGGCGA CCGAGCGCGA GACGCTGGCG ACCGTCCGGC GAGCCGCCCG CCTCCTGTCG ACGGCTGACG GGATGGCGGA GGCCATCCCC AACGTCGGCA CGAACGTCGG GACGGCGCTC CCCGAGGCGA CTGACCTGAC CGACGTGGCG GCGATTCCGG GCCGCATCCA CGCAATGGCG GGCCGGGTCG AGGTGCCCTC CGAACCGGAG TTTGGAGCCT CCAGCAACGT GTCGACGGTG ATCCTCGCGG CTCGGGCCGT CGATCCGTCG ATCGGTGGGG CGCTCAACCT CGCGACCGAC GACGCGCTGC TGGCGGCCGC TCGCGAACGC GACATCGAGC CGTTACAGTT CGACGCCGAC TACGACGACC GCTCCGAGCG GCTCCGCGAA CAGTTCGAGC GACGGGGCGA CGTGCCACGG GTCGTCTACC ACGAGGGAGC GTTCGGGATC GAACCGATCA CGTACGTGCT CGGCGAGACC GCCGAGTCGG CCGCACAGCT GGCCGTCGAG CTGGTCGCCG AACTCGCGTA G
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Protein sequence | MSLVLPSEIV VEEVLPRVRA MLARELADEG LTQQAVADHL GVTQAAVSTY LDGELDRTGP VAGDPRTQAT VEEIAAGLAS GSMDGYDALA ELLDLIAAFE DRGPICTLHE DAMPALRGLG CDLCVRGDDP ALATERETLA TVRRAARLLS TADGMAEAIP NVGTNVGTAL PEATDLTDVA AIPGRIHAMA GRVEVPSEPE FGASSNVSTV ILAARAVDPS IGGALNLATD DALLAAARER DIEPLQFDAD YDDRSERLRE QFERRGDVPR VVYHEGAFGI EPITYVLGET AESAAQLAVE LVAELA
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