Gene Hmuk_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1352 
Symbol 
ID8410872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1277310 
End bp1278230 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content70% 
IMG OID645019683 
ProductHTH DNA-binding protein 
Protein accessionYP_003177180 
Protein GI257387407 
COG category[S] Function unknown 
COG ID[COG1992] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.111494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGG TCTTGCCGAG CGAGATCGTC GTCGAGGAGG TCCTCCCGCG GGTCCGCGCG 
ATGCTCGCAC GCGAACTCGC CGACGAGGGA TTGACACAGC AGGCCGTCGC CGACCACCTC
GGCGTGACCC AGGCCGCAGT GAGTACGTAT CTGGACGGCG AACTCGACCG AACGGGACCA
GTCGCGGGCG ATCCACGGAC ACAGGCGACC GTCGAGGAGA TCGCCGCCGG GCTGGCGAGT
GGATCGATGG ACGGCTACGA CGCGCTGGCC GAGTTGCTCG ACCTGATCGC CGCGTTCGAG
GATCGCGGAC CGATCTGTAC GCTCCACGAG GACGCGATGC CGGCCCTGCG GGGACTGGGC
TGTGACCTCT GTGTCCGGGG CGACGACCCC GCGCTGGCGA CCGAGCGCGA GACGCTGGCG
ACCGTCCGGC GAGCCGCCCG CCTCCTGTCG ACGGCTGACG GGATGGCGGA GGCCATCCCC
AACGTCGGCA CGAACGTCGG GACGGCGCTC CCCGAGGCGA CTGACCTGAC CGACGTGGCG
GCGATTCCGG GCCGCATCCA CGCAATGGCG GGCCGGGTCG AGGTGCCCTC CGAACCGGAG
TTTGGAGCCT CCAGCAACGT GTCGACGGTG ATCCTCGCGG CTCGGGCCGT CGATCCGTCG
ATCGGTGGGG CGCTCAACCT CGCGACCGAC GACGCGCTGC TGGCGGCCGC TCGCGAACGC
GACATCGAGC CGTTACAGTT CGACGCCGAC TACGACGACC GCTCCGAGCG GCTCCGCGAA
CAGTTCGAGC GACGGGGCGA CGTGCCACGG GTCGTCTACC ACGAGGGAGC GTTCGGGATC
GAACCGATCA CGTACGTGCT CGGCGAGACC GCCGAGTCGG CCGCACAGCT GGCCGTCGAG
CTGGTCGCCG AACTCGCGTA G
 
Protein sequence
MSLVLPSEIV VEEVLPRVRA MLARELADEG LTQQAVADHL GVTQAAVSTY LDGELDRTGP 
VAGDPRTQAT VEEIAAGLAS GSMDGYDALA ELLDLIAAFE DRGPICTLHE DAMPALRGLG
CDLCVRGDDP ALATERETLA TVRRAARLLS TADGMAEAIP NVGTNVGTAL PEATDLTDVA
AIPGRIHAMA GRVEVPSEPE FGASSNVSTV ILAARAVDPS IGGALNLATD DALLAAARER
DIEPLQFDAD YDDRSERLRE QFERRGDVPR VVYHEGAFGI EPITYVLGET AESAAQLAVE
LVAELA