Gene Hmuk_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1334 
Symbol 
ID8410854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1261970 
End bp1263157 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID645019665 
Producttranslation-associated GTPase 
Protein accessionYP_003177162 
Protein GI257387389 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.570526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.888182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ACGTCGGACT CGTCGGCAAA CCCTCTGTCG GCAAGTCCAC TTTCTTCAAC 
GCGGCGACGA TGAACGACGT GCCGGAAGGG GCCTATCCCT TCACGACGAT CGACCCCAGC
GTCGGCGAGG CCTACGTTCG CGTCGAGTGT GCCGCCCCCG AGTTCGACCA CACCTGCACG
CCGAATCTCG GCTACTGCGA GGACGGCACC CGGTTCGTCC CGGTGCGTCT CGTCGACGTG
GCCGGCCTCG TCCCCGGTGC CCACGAGGGT CGGGGACTGG GCAACCAGTT CCTCTCGGAC
CTCAACGAGG CCGACGTGTT GCTCCACGTC GTCGACTTCT CCGGGACGAC CGACATCGAG
GGCGAGCCCA CCGAGGACCA CGACCCTCGC GAGGACATCG ACTTCCTCGA AGACGAACTG
GACATGTGGT ACCTCGACGT GCTGGAGAAG GGCATCGAGC GCTATCGTTC CGGGTACCAC
GGCGAGGAGG CGGCCATCGA GGAGGACCTG GCGACCCAGA TGGACGCGTT CCGGACCAAC
AAAGACGAGA TCAAGCAGGT GATCCTCTCG CTGGATCTCG AACTGGACCC CGACACGTGG
GACGACGAGG ACCGCGAGGC ACTCGCCCGC GAGATCCGCA AGCGCACCAA ACCGATGGTG
ATCGCGGCCA ACAAGATGGA CACGCCCGCC GCCCAGGAGA ACTTCGAGGA AATCACGGAC
GACCCCGACT ACGACCACCT GACGATCGTC CCGACCAGCG CCCACGCCGA GAAGGCGCTC
AAGAACGGCG ACGAACAGGG CGTCCTCGAC TACCTGCCCG GCGACAGCGA GTTCGAAATC
GTCGAGGACG TGCCCGGAGA GAAAGCGACC GCACTGGAGC AGATCAGCGA GTTCGTCGGC
GAGTACGGCG GTACCGGCGT CCAGCAGGCC ATCGAGACGG CGCTGTTCGA CGAGCTGGGC
TCGATCGCCA TCTTCCCCGG CGCGCGCAAG CCCCAGGAGG ACGGCACCTT CCTGCAGGAC
TGCTTCGTGC TGGAAGACGG CGCGACCGCC GAGGACTTCG CGTACTTCCT GCACACCGAC
ATCGGCGACG GCTTCCTGCA CGCCCACGAC GTTCGCAGCG GCCGCCAGAT CGGTGCAGAT
ACGGTGCTCG ATCACCGAGA CGTGGTCGAA ATCACGACGA CGAACTAG
 
Protein sequence
MSFDVGLVGK PSVGKSTFFN AATMNDVPEG AYPFTTIDPS VGEAYVRVEC AAPEFDHTCT 
PNLGYCEDGT RFVPVRLVDV AGLVPGAHEG RGLGNQFLSD LNEADVLLHV VDFSGTTDIE
GEPTEDHDPR EDIDFLEDEL DMWYLDVLEK GIERYRSGYH GEEAAIEEDL ATQMDAFRTN
KDEIKQVILS LDLELDPDTW DDEDREALAR EIRKRTKPMV IAANKMDTPA AQENFEEITD
DPDYDHLTIV PTSAHAEKAL KNGDEQGVLD YLPGDSEFEI VEDVPGEKAT ALEQISEFVG
EYGGTGVQQA IETALFDELG SIAIFPGARK PQEDGTFLQD CFVLEDGATA EDFAYFLHTD
IGDGFLHAHD VRSGRQIGAD TVLDHRDVVE ITTTN