Gene Hmuk_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1324 
Symbol 
ID8410844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1250939 
End bp1251550 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content67% 
IMG OID645019655 
ProductTranslation initiation factor IF2/IF5 
Protein accessionYP_003177152 
Protein GI257387379 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain 
TIGRFAM ID[TIGR00311] translation initiation factor aIF-2, beta subunit, putative 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.337196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACG ATGCAGCCCT CGATCGGGCG TTCGACGCGC TCCCCGACCA GCCGCGGGAC 
GCGGGTGAAC GCCTGTCGGT TCCGGACCCC GAAGGACAGA CGGACGGCGC GTTCACACGA
CTGACGAACC TCCAGGCCAT CGCCGACGCG CTCTCGCGAG AGGCAAAGCA CGTCCACCGG
ACGATCCAGC GCGAATTCGG GACCAACGGC CAGTTCGACG GCAACGAAGC GCGCTACAAC
GGTGACTTCG CCGTCAGCGA CTTCGAGGCC GCTATCGACG CCTACGTCGC CGAGTACGTC
ACCTGCTCGG AGTGTGGCCT GCCCGACACC CGACTCACCA CCGAGGACGG CGTCGACATG
CTCCGCTGTG AGGCCTGCGG TGCCTTCCGC CCCGTCACCA AGGAGTCGAC CAAGAACACC
CAGACCGACC GGCCGACCCT CGAAGAGGGC GAGACCTACG AGGTCAAGAT CACCGGCACC
GGCCGCGAGG GCGACGGCGT CGCCGAGAAG GGCAAGTACA CGATCTTCGT CCCCGGCGCC
CAGGAAGGCG ACGAGGTGGA GATCTACATC GAGAACATCA GCGGGACGCT GGCCTTCTCG
CGGCTCGCGT AA
 
Protein sequence
MNYDAALDRA FDALPDQPRD AGERLSVPDP EGQTDGAFTR LTNLQAIADA LSREAKHVHR 
TIQREFGTNG QFDGNEARYN GDFAVSDFEA AIDAYVAEYV TCSECGLPDT RLTTEDGVDM
LRCEACGAFR PVTKESTKNT QTDRPTLEEG ETYEVKITGT GREGDGVAEK GKYTIFVPGA
QEGDEVEIYI ENISGTLAFS RLA