Gene Hmuk_1321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1321 
Symbol 
ID8410841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1247654 
End bp1248562 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID645019652 
Productpreprotein translocase subunit SecF 
Protein accessionYP_003177149 
Protein GI257387376 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGT TCGAGGTACC GGAGGTCGAT TACGACCAGT ACACGAACCG CCAGCTGGCG 
GCCGTGCCGC TGGCGGTGCT CGCCCTCGCG ATACTGATTC TGGTCGGGTG GTCCCTGTTC
GTCTCCGGAT CGGTTGCAGC GCCCGGTGCG CCCGTTACGC CGGGAATCGA CTTCACGGGT
GGCTCCGAAC TGACAGTCGT CACGTCGATG TCCAAGGCGG AGATCGGCGA CGAGTTCGAC
ACCGAACCGA TCTCGGTCCA GCAGGCCGCC GAGAACGCGG AGGCCGAGAC CGTCGGACCG
AACGAGAACC AGTACATCGT CCGGTTCCAG TCGTTCGACA CGGAGTCGCT GCGGGACCAG
GCCCAGAGTG CCGACATGCA GCTCCTCTCG AGCTCGTCGA CCTCTGCGAC CTTCGGCGGT
GACAACCAGA CGACGGCGGT CGTCGGCGTG TTGATCGCCT TCGCCGGGAT GAGTGCGATC
GTCTTCGCGC TCTTTCGATC GTTCGTCCCG AGTATCGCGG TCGTCGTCTC CGCGTTCTCC
GACATCGTCA TCCCGCTGGC GGCGATGAAC GTCCTCGGGA TCGAGCTGTC GCTGGGGACC
GTCGCCGCGC TGCTGATGCT GATCGGTTAC AGCGTCGACT CGGACATCCT CCTGAACAAC
CACATCCTGC GTCGCTCGGG GTCGTTCTAC GAGAGCGTCC ACCGCGCGAT GGAGACCGGT
GTGACGATGA CACTCACGTC GCTGTCGGCG ATGGCAGTGA TGGCAGTGGT CGCTTCGTTC
TTCAACATCC AGCTGATGGC CTCGATCGGG ACTGTGCTGG TGATCGGGCT GGCGGCCGAC
CTGATGAACA CCTACATGTT GAACCTCTCG TTGCTTCGCT GGTACAAGTT CGAGGGGGTG
AACCGATGA
 
Protein sequence
MNAFEVPEVD YDQYTNRQLA AVPLAVLALA ILILVGWSLF VSGSVAAPGA PVTPGIDFTG 
GSELTVVTSM SKAEIGDEFD TEPISVQQAA ENAEAETVGP NENQYIVRFQ SFDTESLRDQ
AQSADMQLLS SSSTSATFGG DNQTTAVVGV LIAFAGMSAI VFALFRSFVP SIAVVVSAFS
DIVIPLAAMN VLGIELSLGT VAALLMLIGY SVDSDILLNN HILRRSGSFY ESVHRAMETG
VTMTLTSLSA MAVMAVVASF FNIQLMASIG TVLVIGLAAD LMNTYMLNLS LLRWYKFEGV
NR