| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1313 |
|---|
| Symbol | |
|---|
| ID | 8410833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 1242659 |
|---|
| End bp | 1243177 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645019644 |
|---|
| Product | blue (type 1) copper domain protein |
|---|
| Protein accession | YP_003177141 |
|---|
| Protein GI | 257387368 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3794] Plastocyanin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.705795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCC GCGACTACCT CGCCGCGCTC GTGACCGCGC CCGTCGTCGG CCTCACCGGC
TGTACCGGCG ACGGCGGGAC GACCGACACG TCGACGCCCA CCGACACACC GACCGCGACC
GACACGCCGA CGCCCACCGA CACGCCGACG CCCACCGACA CACCGACCGC GACCGACACG
CCGACGCCCA CCGACACGCC GACACCCACC GACACGCCGA CGCCGACACC GACGGTCGCC
CGGACGGTCA CGGTGGCACC GGAGGGACGG CTCCGGTTCT CGCCGGAGTC GTTCGAGATC
AGTGCCGGCG AGACCGTCCG CTGGGTGTGG CAAGCGGGCG GTCACAACGT CGCCCCCGAC
ACGACGCCCG ACGGGAGCGA CTGGTCCGGG ACGCCGGGGT CCGACACCTA CGGCAGCGGC
TACACGCACG TCTACACCTT CGAGACGACG GGCACCTACG AGTACTACTG TGTGCCCCAC
CAAGGGAGCG GGATGACCGC GTCCTTCGAA GTCGTCTGA
|
|---|
| Protein sequence | MDRRDYLAAL VTAPVVGLTG CTGDGGTTDT STPTDTPTAT DTPTPTDTPT PTDTPTATDT
PTPTDTPTPT DTPTPTPTVA RTVTVAPEGR LRFSPESFEI SAGETVRWVW QAGGHNVAPD
TTPDGSDWSG TPGSDTYGSG YTHVYTFETT GTYEYYCVPH QGSGMTASFE VV
|
|---|
| |