Gene Hmuk_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1247 
Symbol 
ID8410767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1181435 
End bp1182457 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content67% 
IMG OID645019579 
Productreplication factor C small subunit 2 
Protein accessionYP_003177076 
Protein GI257387303 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.572777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC CCCTGTGGAC CGAGAAACAC GCCCCATCGC TCGCAGATAT CCCCCAGCCA 
CAGGCTCGCG AGCACCTCCA GGGCGCGATC GAGGAGCCGA TGAACCTCCT CGTTCACGGA
CCGATCGGGG CGGGCAAGAC CGCGGCCGTG CGGGCGCTGG CCGAGGAGAC CCACGAGAAC
CCCGACGCCG ACCTCGTCGA GATCAACGTC GCCGACGTGT TCGATCTGAG CAAGAAGGAA
GTCGCCAACG ACCCCCGGTT CTCGTCGTTT ATCGACTCGA AGCGCCGACG TGACTCCTCG
AAGGCGGACC TGATCAACCA CGTCCTCAAG GAGTCGGCGA GCTACACGCC GATGTCGGGC
TCGTACAAGA CGATCCTGCT GGACAACGCC GAAGGGATGC GAGAGGACTT CCAGCAGGCG
CTGCGTCGCG TGATGGAGCA GTACTACGAG GCGACGCAGT TCGTGATCGC GACGCGCCAG
CCCTCCCAGC TCATTCCGCC GATCCGCTCG CGGTGTTTCC CGATCGTGAT GCGTGCGCCG
ACCCACGAGG AGACCGTCGG CGCGCTCGAA CGAGTCGCCG AGAGGGAGGG GGTCGACTAC
GACGCGGACG GCCTGGAGTA CGTCGCGGGC TACGCCGACG GCGACCTCCG CCAGGCGGTG
CTGGCCGCCC AGACAACCGA CGAACAGGCG GGCGAGATCA CGATGAACAC CGCCTACGAG
GCTCTCAACG CCGTCGAGGC CGACGACCAG GTCGAGTCGA TGATCGCGGC CGCCGAGGCC
GGCGAGTTCA CCGACGCGCG TGCGACCCTC GACGATCTGC TCGTCGACGA GGGCCACAGC
GGCGGAGACG TGCTCGAAGA CGTACTCGCG GTCGTTCGGG CTCGCTACTC GGGCGATCGC
GTCGCCGAGA TCCATCGGAT CGCCGGCCGG ATCGACGCCG ACCTCGTCGA GGGGACAAGC
GACCGGATCC ACGTCTCACA TCTGCTGGCC GAGATCGGCG AACTCGCCCG GACGGGAGAG
TGA
 
Protein sequence
MDAPLWTEKH APSLADIPQP QAREHLQGAI EEPMNLLVHG PIGAGKTAAV RALAEETHEN 
PDADLVEINV ADVFDLSKKE VANDPRFSSF IDSKRRRDSS KADLINHVLK ESASYTPMSG
SYKTILLDNA EGMREDFQQA LRRVMEQYYE ATQFVIATRQ PSQLIPPIRS RCFPIVMRAP
THEETVGALE RVAEREGVDY DADGLEYVAG YADGDLRQAV LAAQTTDEQA GEITMNTAYE
ALNAVEADDQ VESMIAAAEA GEFTDARATL DDLLVDEGHS GGDVLEDVLA VVRARYSGDR
VAEIHRIAGR IDADLVEGTS DRIHVSHLLA EIGELARTGE