Gene Hmuk_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1220 
Symbol 
ID8410740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1161551 
End bp1162405 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content54% 
IMG OID645019553 
Producttransposase IS4 family protein 
Protein accessionYP_003177050 
Protein GI257387277 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.167513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGGG AAGACGAGTT TGTGTCCAGC AAACTCGCCC GCTTCACTGA TCGGGTTGTC 
TCGCTTGCTC AAAAAGCCGT CGTCGGCGAA CCAGATCCAG CGTACGAAGA AGGAGAAAAC
GGCTACGCAG ATTGGGTGAT CGTGGCGATT CACGGCCTCC GCGAGTATCT TGATCACACG
TATCGGCGGT TGCTGGACGT GCTCCACGAG ATGCATGGAA TTGTCGCTAA ACTCGACCTA
GCGGTGGCTG ATCTGCCTGA TTTCACGACC GTGTGTGCGC GCAAGCAGGA TCTGGAAATG
CGTATTTGGC GCGTCTTGCT GCGGCTGTCG GCGGAGTTGC ACGACCTCGG TGATGTTCAG
GCAATTGACG CAACCGGCAT GGATCGGATT GCTGCCAGCC AACACTACGC AAAACGGACG
AACTACACGT TCGAGGCGGT GAAAACGACC CTTCTGAGTG ACTGCAAGAC TGGTGCGATC
CTAGATATAC ATTGCTCGAT GAAACAACCG CACGATTCCA AGATCGGCTG GCAGATGGTC
AAACGCAATC TCGACAAACT GAATATTCTC ACCGCCGACA AAGGCTACGA CTGGTGGTTA
CTTCGCCAAA GACTGCGTGC AGAAGGCGTT AAACCGGTGA TCAAGCACCG CGAATTCGGC
TGGCACGGCA TCGCCAACAA TTTCTTGCAA GATGATACGA TCTACCATCA ACGCTCGAAC
GCCGAATCCA CGTTTTTCGC GCTGCGACGC AAATACGGCG AGATCGTTCG GGCTCGAACC
TGGTTCGGTC AGTTCCGCGA ACTCGTTCTG AAATGTGCTG TCAGAAACAT CGAACTCAGC
GTCAGCCACT CATGA
 
Protein sequence
MKREDEFVSS KLARFTDRVV SLAQKAVVGE PDPAYEEGEN GYADWVIVAI HGLREYLDHT 
YRRLLDVLHE MHGIVAKLDL AVADLPDFTT VCARKQDLEM RIWRVLLRLS AELHDLGDVQ
AIDATGMDRI AASQHYAKRT NYTFEAVKTT LLSDCKTGAI LDIHCSMKQP HDSKIGWQMV
KRNLDKLNIL TADKGYDWWL LRQRLRAEGV KPVIKHREFG WHGIANNFLQ DDTIYHQRSN
AESTFFALRR KYGEIVRART WFGQFRELVL KCAVRNIELS VSHS