Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_1135 |
Symbol | |
ID | 8410654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 1082972 |
End bp | 1083652 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 645019470 |
Product | ribose-5-phosphate isomerase A |
Protein accession | YP_003176968 |
Protein GI | 257387195 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0120] Ribose 5-phosphate isomerase |
TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0350264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG GCGGGAGCGA CGACGCGAAG CGTGCGGCGG GAGAATCGGC CGCCGAGGCC GTCGAAGACG GGATGGTGGT CGGGCTCGGG ACCGGCTCCA CCGCGGCCCA CGCGATACGG GCCATCGGCG CGGCCGTCGA CGCCGGGCTG GACGTGACCG GGGTTCCGAC CTCGTTTCAG TCCCGCGAAC TCGCGCGGGA AGCGGGGATC CCGTTGACCG ACCTCGACGC CGCCGAGATC GATCTCGCGA TCGACGGCGC GGACCAGGTC GCTGGCGGGT GTCTCGTCAA GGGCGGCGGC GCGGCCCACG CCCGCGAGAA GATCGTCGAC ACGGCGGCCG ACCGGCTCCT CGTCGTCGTC GATCCGACCA AGGAGGCGGA CGTGCTCGAC CACCCGGTCC CACTCGAACT GCTGCCGGCC GCCAGACGGC CCGTCGCGGC GGCCGTCGAG CGACTCGGCG GGGAACCTGA GCTTCGCCGC GCCGAGCGCA AGGACGGGCC GGTGGTGACC GACAACGGTA ACCTCGTGTT CGACTGTGCG TTCGGTGCCA TCGCCGACCC CGCCGCGCTG GCGGCGGACC TCGCGACGAT CCCCGGCGTC GTCGAGCACG GCCTGTTCGT CGACGTGGCC GACGAGATCC ACGGCGGGAC GGCTGACGGC GTCACCGTTA CCGAACTGTA G
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Protein sequence | MKQGGSDDAK RAAGESAAEA VEDGMVVGLG TGSTAAHAIR AIGAAVDAGL DVTGVPTSFQ SRELAREAGI PLTDLDAAEI DLAIDGADQV AGGCLVKGGG AAHAREKIVD TAADRLLVVV DPTKEADVLD HPVPLELLPA ARRPVAAAVE RLGGEPELRR AERKDGPVVT DNGNLVFDCA FGAIADPAAL AADLATIPGV VEHGLFVDVA DEIHGGTADG VTVTEL
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