Gene Hmuk_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1135 
Symbol 
ID8410654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1082972 
End bp1083652 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID645019470 
Productribose-5-phosphate isomerase A 
Protein accessionYP_003176968 
Protein GI257387195 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0350264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG GCGGGAGCGA CGACGCGAAG CGTGCGGCGG GAGAATCGGC CGCCGAGGCC 
GTCGAAGACG GGATGGTGGT CGGGCTCGGG ACCGGCTCCA CCGCGGCCCA CGCGATACGG
GCCATCGGCG CGGCCGTCGA CGCCGGGCTG GACGTGACCG GGGTTCCGAC CTCGTTTCAG
TCCCGCGAAC TCGCGCGGGA AGCGGGGATC CCGTTGACCG ACCTCGACGC CGCCGAGATC
GATCTCGCGA TCGACGGCGC GGACCAGGTC GCTGGCGGGT GTCTCGTCAA GGGCGGCGGC
GCGGCCCACG CCCGCGAGAA GATCGTCGAC ACGGCGGCCG ACCGGCTCCT CGTCGTCGTC
GATCCGACCA AGGAGGCGGA CGTGCTCGAC CACCCGGTCC CACTCGAACT GCTGCCGGCC
GCCAGACGGC CCGTCGCGGC GGCCGTCGAG CGACTCGGCG GGGAACCTGA GCTTCGCCGC
GCCGAGCGCA AGGACGGGCC GGTGGTGACC GACAACGGTA ACCTCGTGTT CGACTGTGCG
TTCGGTGCCA TCGCCGACCC CGCCGCGCTG GCGGCGGACC TCGCGACGAT CCCCGGCGTC
GTCGAGCACG GCCTGTTCGT CGACGTGGCC GACGAGATCC ACGGCGGGAC GGCTGACGGC
GTCACCGTTA CCGAACTGTA G
 
Protein sequence
MKQGGSDDAK RAAGESAAEA VEDGMVVGLG TGSTAAHAIR AIGAAVDAGL DVTGVPTSFQ 
SRELAREAGI PLTDLDAAEI DLAIDGADQV AGGCLVKGGG AAHAREKIVD TAADRLLVVV
DPTKEADVLD HPVPLELLPA ARRPVAAAVE RLGGEPELRR AERKDGPVVT DNGNLVFDCA
FGAIADPAAL AADLATIPGV VEHGLFVDVA DEIHGGTADG VTVTEL