Gene Hmuk_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1047 
Symbol 
ID8410566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp998475 
End bp999335 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID645019383 
ProductTranscription factor TFIIB cyclin-related 
Protein accessionYP_003176881 
Protein GI257387108 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.235926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAA CGGCACAGCG ATGTCCGGAG TGTGACGGCG CGATCGACGC ATCGGCACGC 
GAAGCAGTGT GTACCCAGTG TGGCCTCGTC GTCGACGAGG ATCAGCTCGA CCGCGGCCCC
GAGTGGCGGT CGTTCGAGGA CGACGGAGAG CAGAAGGCAC GCACCGGCGC GCCGCTGACC
CGCTCGCGCC ACGACCGCGG GCTCTCGACT GAGATCGGAC GATCGACCCG GCTCAAGGGC
CGCAAGCGCC GCCAGATGGC GCGCCTCCGT CGGGAGCACA GCCGCGCCCA GACGGGCTCG
AAGCGCGATC GGAACCAGCG CATCGGCTTC ATCGAGATTC GGCGGCTCGT GAGTCGGCTC
GACCTCTCGT CGACGATTCG AGATCGGGCC TGTGTCCTCT TCGAGTCCGC ACAGGAGGCC
GATCTCCTGG TGGGACGGTC GATCGAGGGG TTCGCGGCCG CAGCGGTGTA CGCGACCTGT
CGCACGAGCG AGATCGCACG GACCGTCGAG GAGGTCGCCG CCGACGCTCA GGCCAGCACC
GGCGAGCTAC GAGTCGCCTA CGACGCGATC AACCGCGAGC TGGGACTGCC GACGGGTCCG
ATCGATCCGC GCGAGTATCT CCCGCGTTTC GCGAGCGAGC TCGACGTTCC CCACGAGATC
GAACGGCGAG CGACGGCACT GGCTGATCTG GCAGCAGAGC GCAATCTGAT CGCAGGCAAG
AACCCCGGTG GCGTCGCCGC CGCGTGTCTC TACACCGCCG CCCGAGAGGC GGACTACGAG
CTGACGCAGG CTCGGGCGGC CGCCGTCGCA GACGTGAGTC CGGTGACGCT TCGGTCGACG
TATCAGGCCC TCCAGGACTG A
 
Protein sequence
MSQTAQRCPE CDGAIDASAR EAVCTQCGLV VDEDQLDRGP EWRSFEDDGE QKARTGAPLT 
RSRHDRGLST EIGRSTRLKG RKRRQMARLR REHSRAQTGS KRDRNQRIGF IEIRRLVSRL
DLSSTIRDRA CVLFESAQEA DLLVGRSIEG FAAAAVYATC RTSEIARTVE EVAADAQAST
GELRVAYDAI NRELGLPTGP IDPREYLPRF ASELDVPHEI ERRATALADL AAERNLIAGK
NPGGVAAACL YTAAREADYE LTQARAAAVA DVSPVTLRST YQALQD