Gene Hmuk_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1030 
Symbol 
ID8410547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp982087 
End bp982539 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID645019364 
Producthelicase 
Protein accessionYP_003176864 
Protein GI257387091 
COG category[R] General function prediction only 
COG ID[COG1202] Superfamily II helicase, archaea-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0483142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATCA CCGACAAGAT CTACGTCAAG AACCACCGCC AGCTGGCCTC ACAGCTTGAG 
ACCTCGTTCC CGAAGGGCGC GTTCAAGGGC GCGACGCTGG ACATCCTCTT CCAGGGCGAG
GGACTCGCGA AGCTCAACGA GGCGAGCCAG GATCGGGTCC TCGATTTCGC CGAGGACTTC
CTCGACTGTG ACTGTCAGGC AAACCCCCAC TGTGGCTGTC CCGAGGAGAA GTTCGTCCGG
TACCTCCTGG AGCTGCGGGC ACAGGGACTG GGACCCGACG CCATCGTCGA CGTGATGGGC
GACGACTACA TGCTGTACGC CTATCCCGGC GACGTGCTCT CCTTTCTGGA CGACTCGGTC
AGGACGCTCG AAGCAGTCGA GGCACTGGCA GACGTAGACG AAAAACCGGA CGTAGCGAAG
CAGGCACGCG AGAGCAGAGA CGAACTGGTG TAG
 
Protein sequence
MAITDKIYVK NHRQLASQLE TSFPKGAFKG ATLDILFQGE GLAKLNEASQ DRVLDFAEDF 
LDCDCQANPH CGCPEEKFVR YLLELRAQGL GPDAIVDVMG DDYMLYAYPG DVLSFLDDSV
RTLEAVEALA DVDEKPDVAK QARESRDELV