Gene Hmuk_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0985 
Symbol 
ID8410502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp939698 
End bp941116 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content70% 
IMG OID645019321 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003176821 
Protein GI257387048 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.747719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCG GAGACGTAAC GACAGGAACG GAACTGCTGG TCGTCGGCGG CGGGCCGGGC 
GGGTACGTGG CCGCCATCCG GGCCGCTCAG CTCGGCGTCG ACACCACACT CGTCGAGCGA
GACGCCTACG GAGGGACCTG CCTCAACCAC GGCTGTATCC CCTCGAAGGC GCTGATCTCG
GGGGCAGACG TGGCCCACCG GGCCGGCCAG GCCGAGGAGA TGGGCGTCTA CGCCGACCCG
GCGGTCGACC TGTCCGGGAT GGTCGAGTGG AAAGACGGCG TCGTCACCCG GCTGACGCGG
GGCGTCGAGT CGCTGGCGAA GTCGGCCGGC GTGGAACTGA TCGAGGGCGA GGCGACGTTT
ACCGGCGAGC ACACCGCACG GATCGCCCAC GGCGGCGACG GACAGGGCTC GGAGACCGTC
GAGTTCGAGC ACGCGATCGT CGCCACGGGG AGCCGCCCGA TCCAGGTCCC CGGCTTCGAG
TTCGACGCCG ACCCGATCCT CTCCTCGAAG GAGGCACTCG CACTGGAGTC GCTGCCCGAG
CGGCTCCTGG TCGTCGGCGC GGGCTACATC GGCATGGAGC TGTCGACGGT GTTCCAGAAG
CTCGGCAGCG AGGTGACCGT CGTCGAGATG CTGGACGAGG CACTGCCGGG CTTCGAGGAC
GATATTGCCA CGCTGGTCCG GGAACGGGCC GAGGAGATCG GCGTCGACTT CTACTTCGGG
GAGGCGGCCG ACAGCTGGGA GCAGGCGGGC GAGGAGATCG TCGTCCACAC GGAGGACGAA
GACGGCGATC TGACGCGGTT CGACGCCGAG AAGGCACTCG TCGCAGTCGG TCGCCAGGCG
GTCACTGACG GGCTGGGACT GGACGAACTT GGCATCGAAC CCGACGAGGA CGGGTTCCTG
GCGACGGACG AGCAGGCCCG GACCGACGCC GAGCACGTCT TCGCCGTCGG CGACGTGGCC
GGCGAGCCGA TGCTGGCCCA CAAGGCGATG GCCGAGGGCG AGGTCGCCGC CGAGGTCGTC
GCGGGCGAGC CGGCCGCACT GGACCACCAG GCGATTCCGG CCGCGGTCTT TACCGAACCG
GAGATCGGGA CCGTCGGCAT GACCGAAGCG GAAGCCGCCG ACGCCGGGTT CGACCCCGTC
GTCGGCCAGA TGCCGATGCG GGCCAACGGC CGCGCGCTGA CGGTCGACGA GAAAGCGGGG
TTCGTCCGGA TCGTCGCCGA CGACGAGACC GGCTTCGTCC TGGGCGCACA GATCGTCGGC
CCGGAGGCCT CCGAGTCCAT CGCCGAGGTC GGCCTGGCAA TCGAGATGGG CGCGACGCTC
GAAGACATCG CCGGCACGAT CCACACCCAC CCGACGCTCT CGGAGGCCGT CCACGAGGCC
GCGCTGGCGG CCCGCGGCGA AGCCATCCAC ACGCGGTAA
 
Protein sequence
MVVGDVTTGT ELLVVGGGPG GYVAAIRAAQ LGVDTTLVER DAYGGTCLNH GCIPSKALIS 
GADVAHRAGQ AEEMGVYADP AVDLSGMVEW KDGVVTRLTR GVESLAKSAG VELIEGEATF
TGEHTARIAH GGDGQGSETV EFEHAIVATG SRPIQVPGFE FDADPILSSK EALALESLPE
RLLVVGAGYI GMELSTVFQK LGSEVTVVEM LDEALPGFED DIATLVRERA EEIGVDFYFG
EAADSWEQAG EEIVVHTEDE DGDLTRFDAE KALVAVGRQA VTDGLGLDEL GIEPDEDGFL
ATDEQARTDA EHVFAVGDVA GEPMLAHKAM AEGEVAAEVV AGEPAALDHQ AIPAAVFTEP
EIGTVGMTEA EAADAGFDPV VGQMPMRANG RALTVDEKAG FVRIVADDET GFVLGAQIVG
PEASESIAEV GLAIEMGATL EDIAGTIHTH PTLSEAVHEA ALAARGEAIH TR