Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_0947 |
Symbol | |
ID | 8410463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013202 |
Strand | + |
Start bp | 909580 |
End bp | 910356 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645019282 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_003176783 |
Protein GI | 257387010 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.264338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACG ACCGAACGCC ACGACGAATT CAGTCGGTGG AGTTGGCGTT CGACATCCTC GAAGTGTTAC GCGATTCGGG AGGGGCGACG GTGACGGAGG TCGCCGACCA GATCGATCGC TCACCGGGCA CGACCCACAC CTACCTCGCG ACGATGGCAG ACCGAGGGTA CGTCCGAAAC AGAGACGGAG AGTACCAGGT CGGACTGTTC GCAGTGCCAC TCGGAGAGTA CGTCAGAGGT CAGTCCCAGC TCTACCGGGT CGGCAAGTCG GAGGTCGACG AGCTAGCACA GGAGACCGGC GAGGCCAGCC ACCTCGTGGT CGAGAGCCAC GGCCGCGAAA TCCCGCTGTA CGAGCGGTTC GGCCCAGACG CCGTCGGCGA GACGCTGTAC GAAGAGAACA AGGGCCACCC GCGGTGGAAC CTCCACTGCT CTGCCGCCGG CAAAGCGATT CTGGCCCACA CGCCGCCAGA GCGGCGCGAC GAGATCCTCA CGAACTACGA GTTCGCCGAA CGGACGCCAC AGACGACGAC CGACGAGGCG TCGCTGCGCG AAGAGCTCGA AGCGGTCCGA CAGCAGGGAT TCGCACAGAA CGACGAAGAG CAGATCACGG GGTTGCGCGC CGTCGGTGCG CCGATCCGAT ACGAGGGCCA GATTCGCGGA GCGATCAGTC TCTCGGCCCC GACGAGCAGG CTCCAAGGCC AACAGTTCGC CTCTGAGATT CCGGAGCGCG TCGTGCAGGC GGCAAACGTC GTCGAGATCA ATCTCCAGTC CGCATGA
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Protein sequence | MTNDRTPRRI QSVELAFDIL EVLRDSGGAT VTEVADQIDR SPGTTHTYLA TMADRGYVRN RDGEYQVGLF AVPLGEYVRG QSQLYRVGKS EVDELAQETG EASHLVVESH GREIPLYERF GPDAVGETLY EENKGHPRWN LHCSAAGKAI LAHTPPERRD EILTNYEFAE RTPQTTTDEA SLREELEAVR QQGFAQNDEE QITGLRAVGA PIRYEGQIRG AISLSAPTSR LQGQQFASEI PERVVQAANV VEINLQSA
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