Gene Hmuk_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0947 
Symbol 
ID8410463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp909580 
End bp910356 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content64% 
IMG OID645019282 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003176783 
Protein GI257387010 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.264338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG ACCGAACGCC ACGACGAATT CAGTCGGTGG AGTTGGCGTT CGACATCCTC 
GAAGTGTTAC GCGATTCGGG AGGGGCGACG GTGACGGAGG TCGCCGACCA GATCGATCGC
TCACCGGGCA CGACCCACAC CTACCTCGCG ACGATGGCAG ACCGAGGGTA CGTCCGAAAC
AGAGACGGAG AGTACCAGGT CGGACTGTTC GCAGTGCCAC TCGGAGAGTA CGTCAGAGGT
CAGTCCCAGC TCTACCGGGT CGGCAAGTCG GAGGTCGACG AGCTAGCACA GGAGACCGGC
GAGGCCAGCC ACCTCGTGGT CGAGAGCCAC GGCCGCGAAA TCCCGCTGTA CGAGCGGTTC
GGCCCAGACG CCGTCGGCGA GACGCTGTAC GAAGAGAACA AGGGCCACCC GCGGTGGAAC
CTCCACTGCT CTGCCGCCGG CAAAGCGATT CTGGCCCACA CGCCGCCAGA GCGGCGCGAC
GAGATCCTCA CGAACTACGA GTTCGCCGAA CGGACGCCAC AGACGACGAC CGACGAGGCG
TCGCTGCGCG AAGAGCTCGA AGCGGTCCGA CAGCAGGGAT TCGCACAGAA CGACGAAGAG
CAGATCACGG GGTTGCGCGC CGTCGGTGCG CCGATCCGAT ACGAGGGCCA GATTCGCGGA
GCGATCAGTC TCTCGGCCCC GACGAGCAGG CTCCAAGGCC AACAGTTCGC CTCTGAGATT
CCGGAGCGCG TCGTGCAGGC GGCAAACGTC GTCGAGATCA ATCTCCAGTC CGCATGA
 
Protein sequence
MTNDRTPRRI QSVELAFDIL EVLRDSGGAT VTEVADQIDR SPGTTHTYLA TMADRGYVRN 
RDGEYQVGLF AVPLGEYVRG QSQLYRVGKS EVDELAQETG EASHLVVESH GREIPLYERF
GPDAVGETLY EENKGHPRWN LHCSAAGKAI LAHTPPERRD EILTNYEFAE RTPQTTTDEA
SLREELEAVR QQGFAQNDEE QITGLRAVGA PIRYEGQIRG AISLSAPTSR LQGQQFASEI
PERVVQAANV VEINLQSA