| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_0901 |
|---|
| Symbol | leuS |
|---|
| ID | 8410416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | - |
|---|
| Start bp | 864125 |
|---|
| End bp | 866884 |
|---|
| Gene Length | 2760 bp |
|---|
| Protein Length | 919 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 645019235 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_003176737 |
|---|
| Protein GI | 257386964 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.102143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACC GCTACAACCA CGCCCGCGTC CAGGAGTACT GGCAACACGT CTGGGACCGC
GAGGGCGTGT ACGAACTCGA CGACGCGGCG ATCGACCGCG GCGAGGGGAC CTACGTGCTG
GGGATGTTCC CCTACACGTC GGGCTCGCTG CACATGGGCC ACATCCGCAA CTACGCGATC
ACCGACGCCG TCGCTCGCTA CCGGCGGATG AACGGCGAGG ACGTGCTCCA CCCGATGGGG
TGGGACGCCT TCGGGCTCCC GGCGGAGAAC GCCGCCTACG AGCGCGACAC CGACCCGGAG
TCGTGGACTC GAACGTGCAT CGAGCAGATG CGCGACGAAC TCGAACGGAT GGGGTTTGGC
TACGACTGGT CTCGCGAGAT CACGACCTGT GAGCCGGAGT ACTACCGGTG GAACCAGTGG
CTCTTTACCC GCTTCTACGA GAACGATCTC GTCGAGTACA CCGGCGCGCA GGTCAACTGG
TGCCCGGACT GCGAGACCGT CCTGGCCGAC GCACAGGTCG ACGAGGGCGA CGGTCACGCC
GACGTGCGCG ACGACACGCC GGGACACGCC GACGGCGAGG GGGTCTGCTG GCGCTGTGGC
ACCGCGGTCG AGACCCGCGA ACTCGACCAG TGGTTCTTCA CGATCACCGA CTACGCGGAC
GAACTCGCGG ACGGCCTGGA TGCCCTCGAC GGGTGGCCCG AAAGCGTCCG CGAGATCCAG
CGCAACTGGA TCGGCCGCCG CGAGGGTGCC CAGATCACCT TCGAGATCGA CGGCGATCCG
ATCGACGTGT TCACGACCCG GCCAGACACC GTCTTCGGGG CGACGTATCT GGCCCTCGCG
CCGGGCCACG GGGTCGCCCG CGAACTCGCC CAGCGCACGT CCTCGGGAGC GAGCGAGGCG
GTCGACGACT TCCACGACCG CGCCGCGGAC GGCCGAGCCG AGGGAACGGC CGGCGTCGAC
ACTGGCCTCA CCGCGACGAA CCCGGTCACC GGCGAGGAGA TCCCCGTCTA CGTCGCCAGC
TACGTCCTCT CTGACGTGGG GACGGGCGCG GTGATGGGCG TGCCGGCCCA CAACGAGCGC
GACCACGCCT TCGCCACGGC ACACGACCTC CCGGTCGAGC GAGTCGTCGC GCCCAACGAC
GGCGAACACG GAGAACGTAA CGGCCAGCCC CTCCCGTACA CCGACGAGGG GATGATCGTC
GCCGACGGGG CCTACGAGGG GCTGGCGAGC GCGGCCGCCC GCGAGCGCTT GCTGGACCAC
GACGCCGTGA CGGCGGCGAC AACCTACCGG CTCCGGGACT GGCTCATCTC ACGACAGCGC
TACTGGGGGA CGCCGATCCC GATGGTCCAC TGCGAGGAGT GTGGCGCGGT GCCGGTGCCC
GACGAGGACC TCCCCGTCGA ACTTCCCGAG TTCGTCCAGA CCACGGGGAA CCCACTGGCC
GCGAGCGACG AGTTCGTCCA GACGACCTGT CCCGACTGTG GCGGCCCCGC CGAACGCGAG
ACCGACACCA TGGACACCTT CGTCGACTCC TCCTGGTACT TCCTGCGGTA CCTGAACCCC
GACCTCTCGA CGGCTCCCTT CGAGAACGAG GTCGCCGACG ACTGGCTCCC GGTCGACGTG
TACGTCGGTG GCGACGAGCA CGCGGTGCTT CACCTGCTGT ACATCCGCTT TTTCACCCGC
GCGCTGGCGG ACCTGGGTCT GCTCGACCGG CGCGAGCCCG TCGACCGGCT GGTCAACCAG
GGGACGGTGT TGCACGGCGG CGAGAAGATG TCCAAGTCGA AGGGCAACGA CGTGGCTCCC
CACGAGTACG GCGCGGAGAC CACGCGGCTG TTCGTCCTCT CGGCGGCACA CCCCGGCCAG
GACTTCGAGT GGACGGCGAC GGACGTGAGC AACGCCTACG AGTTCCAGCA GGACGTGTAC
CGGATGGTGC TGTCGTTCAC CGACGGTGCC GGCGGTCGGA CCGAGAGCAG ACCGCACGAC
GCCTACCTCG AACGGGAGAT CGATCGGACG ATCGCCGCGG TCACCGACGA GTACGACCGC
TTTCGCTTCC ACCGGGTCGT CACCGAACTC CAGCAGTTCG CCCAGTTGCT GCGACGCTAC
CGCGAGTACG AGACCCCGTA CCGCTTCGCG TACAGTCGGG GGCTGCGCGT GCTGACGAAA
CTGCTCGCGC CGCTCGCCCC CTATCTGGCC GAGGAGCTGT GGTCCGCGCT GGACGGCGAG
GGGCTGATCG CCGGTGCCGA CTGGCCCACG CCGCTGCACG ACATCCCCGA CTACCGCACC
GAGCGCGAAC TCGTCCGGAC GACGCTCGCT GACGTGCGCG AGATCACCGA CGTGGTCGAG
ATCACCGATC CAGACGAGAT CGAGCTCGTC GTCGCGCCCG ACTGGAGCTA TCGCGCCTAC
GAGATCGCTC GCGAGGTGAA CCAGGAGCCA GACTCGACCG CGAGCGAGGG GAGCCGTCGC
TCTCGGGACG GCAGTACACC CGCGGGACAG CCGGCAGACG GGGCGGTCGT CGGTCGTATC
ATGGACGCCG ACGCCGTGCC CGGCACCGAG GCGGCGGCCG ACTACGCGGC CGAGCTGGCC
GACCGTTCGG GCGGGTTCGA GCCAGTGCTG GCTCCCGAGC GGGAGCTGAC GGTGCTGGAA
CAGGCGTCGT GGCTGTTCGC CGAGGAGTTC GACGCGGACG TGGTCGTCAG GCGAGCCGAG
CCCGACGGCG AGCAGGCACA CAGAGCCCGG CCGAACAAGC CCGCCATCCA CATCACGTGA
|
|---|
| Protein sequence | MSNRYNHARV QEYWQHVWDR EGVYELDDAA IDRGEGTYVL GMFPYTSGSL HMGHIRNYAI
TDAVARYRRM NGEDVLHPMG WDAFGLPAEN AAYERDTDPE SWTRTCIEQM RDELERMGFG
YDWSREITTC EPEYYRWNQW LFTRFYENDL VEYTGAQVNW CPDCETVLAD AQVDEGDGHA
DVRDDTPGHA DGEGVCWRCG TAVETRELDQ WFFTITDYAD ELADGLDALD GWPESVREIQ
RNWIGRREGA QITFEIDGDP IDVFTTRPDT VFGATYLALA PGHGVARELA QRTSSGASEA
VDDFHDRAAD GRAEGTAGVD TGLTATNPVT GEEIPVYVAS YVLSDVGTGA VMGVPAHNER
DHAFATAHDL PVERVVAPND GEHGERNGQP LPYTDEGMIV ADGAYEGLAS AAARERLLDH
DAVTAATTYR LRDWLISRQR YWGTPIPMVH CEECGAVPVP DEDLPVELPE FVQTTGNPLA
ASDEFVQTTC PDCGGPAERE TDTMDTFVDS SWYFLRYLNP DLSTAPFENE VADDWLPVDV
YVGGDEHAVL HLLYIRFFTR ALADLGLLDR REPVDRLVNQ GTVLHGGEKM SKSKGNDVAP
HEYGAETTRL FVLSAAHPGQ DFEWTATDVS NAYEFQQDVY RMVLSFTDGA GGRTESRPHD
AYLEREIDRT IAAVTDEYDR FRFHRVVTEL QQFAQLLRRY REYETPYRFA YSRGLRVLTK
LLAPLAPYLA EELWSALDGE GLIAGADWPT PLHDIPDYRT ERELVRTTLA DVREITDVVE
ITDPDEIELV VAPDWSYRAY EIAREVNQEP DSTASEGSRR SRDGSTPAGQ PADGAVVGRI
MDADAVPGTE AAADYAAELA DRSGGFEPVL APERELTVLE QASWLFAEEF DADVVVRRAE
PDGEQAHRAR PNKPAIHIT
|
|---|
| |