Gene Hmuk_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_0893 
Symbol 
ID8410408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp860381 
End bp860986 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content65% 
IMG OID645019228 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003176730 
Protein GI257386957 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.17617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTG ACGACGAGAT CATGGAGGCC ACGTTTGCGG CTCTGTGCAA GCACGGCTAT 
GCGGATCTGA CGATGCAGTC GATCGCCGAC GAGTTCGAGA AGAGCAAGTC GCTGCTGCAC
TACCACTACG ACTCGAAAGA GGACCTGATC GTCTCGTTCA TGGAGCATCT CCTGGAGAAC
TTTCTGGAGG AGTTCGACGA GGACAGCGAC GCAGAGCCCA TGGACCAGCT GCTTCGCATG
ACCGAGATCG TCGTCGAGGG AGACGACAGC GAGGGCCCCG ACGACGTGCA CATGGCGCTG
CTGGGGCTGC GCGCACAGGC ACCCTACGAC GAGGCGCTGC GCGCCCAGCA GGTCCGCAAC
GACTGTCATA TCCGCGAGCT GATCGCCGAC ATCGTCCGGG ACGGCATCGA GCAGGGCCAG
TTCCGCGACG ACGTGGATCC CGAGCGGTTC GCCGCGGCGT TCCGGTCCGC GATCGAGGGA
GCCCAGTCAC ACGACGTGAT CCTCGGCGCG GACGCGCCGA CCGAGACGGC GCTGGCGGGC
ATCGAGGAGT ACCTTCTCCG GGGACTTCTG GCGGACGGTG AGACCCTGGA GGGACGGACC
GCGTGA
 
Protein sequence
MTTDDEIMEA TFAALCKHGY ADLTMQSIAD EFEKSKSLLH YHYDSKEDLI VSFMEHLLEN 
FLEEFDEDSD AEPMDQLLRM TEIVVEGDDS EGPDDVHMAL LGLRAQAPYD EALRAQQVRN
DCHIRELIAD IVRDGIEQGQ FRDDVDPERF AAAFRSAIEG AQSHDVILGA DAPTETALAG
IEEYLLRGLL ADGETLEGRT A